Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  170 bits (431), Expect = 5e-47
 Identities = 87/227 (38%), Positives = 152/227 (66%), Gaps = 4/227 (1%)

Query: 28  AVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTGGEIRVNGELLEHKDYSTRCK 87
           AV+ +SFTL AG T+G +G++G GKS+LAR L G+V  + G+I ++ + L+ +    R +
Sbjct: 319 AVQNLSFTLPAGLTLGLVGESGCGKSSLARCLVGLVPASEGQIWLDQQPLDLRSSRDRQR 378

Query: 88  L---IRMIFQDPNTSLNPRLQIGTILEGPLK-RNTSMTPEARMRRVKDTLQRVGLLPEHA 143
           L   ++M+FQDP  +L+PR  +G+ +  PL+ +       A  R +K  LQRV L  +  
Sbjct: 379 LRQTVQMVFQDPAAALDPRWTVGSAILEPLRIKQPRRDRTADQRLLKQWLQRVDLPTDIG 438

Query: 144 YFYPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEEMGVSF 203
             YP   + GQ+QR+C+ARALI QP ++I DE+++ LD+++++QILNL  +LQ E+G+++
Sbjct: 439 DRYPHEFSGGQRQRICIARALIGQPRLLICDESVSALDVSVQAQILNLLKQLQAELGLTY 498

Query: 204 VYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMI 250
           +++S  + V+++++D+I+VM++G + E   T ++   PQ   T+R+I
Sbjct: 499 LFISHDLAVVRYMSDRILVMNQGQLEEDSPTEQLFQRPQSDYTRRLI 545



 Score =  127 bits (319), Expect = 5e-34
 Identities = 75/242 (30%), Positives = 131/242 (54%), Gaps = 19/242 (7%)

Query: 28  AVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTG---GEIR---VNGE------ 75
           A++ +   ++ G+++G +G++GSGKS     + G++  T    G+I    V G+      
Sbjct: 20  ALQGLDLVVQPGESVGIVGESGSGKSVACLAIPGLLPKTARCSGQIAFRSVAGQSSRDLL 79

Query: 76  -LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQ 134
            L E +    R   +  IFQ+P +SLNP    G  L   ++++  ++     +RV   LQ
Sbjct: 80  TLPERELRQLRGDRLGFIFQEPLSSLNPVFSAGFQLLEAIQQHLPLSQAEAQQRVIALLQ 139

Query: 135 RVGLLPEHAYF------YPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQI 188
            V L+ E +        YP  L+ GQ+QR+ +A AL   P +++ADE    LD  +++ +
Sbjct: 140 EVQLIREPSQAAQILRRYPHQLSGGQRQRLMIAIALAANPDLLLADEPTTALDATVQASV 199

Query: 189 LNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQR 248
           L L   LQ++  ++ ++VS  +GVI  + D+++V++ G VVE G   +VL  PQHP TQ 
Sbjct: 200 LQLLRRLQQQRQMAMIFVSHDLGVIAEVADRVVVLYRGQVVEQGRVADVLNSPQHPYTQG 259

Query: 249 MI 250
           ++
Sbjct: 260 LV 261