Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 593 a.a., peptide transport ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  178 bits (452), Expect = 2e-49
 Identities = 92/252 (36%), Positives = 159/252 (63%), Gaps = 6/252 (2%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQ--HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAG 61
           +L+V NL   F  + G L++ ++  HAV+ +S ++  G+T+  +G++G GKST  + L  
Sbjct: 293 MLQVENLTVRFDIKGGILQRPVRRLHAVEGISLSVRRGETLSLVGESGCGKSTTGKALLN 352

Query: 62  MVAPTGGEIRVNGELLEHKDYSTRCKLIR---MIFQDPNTSLNPRLQIGTILEGPLKRNT 118
           +V P  G+IRV+G        ST   ++R   MIFQDP  SL+PR+++G ++  PL  + 
Sbjct: 353 LV-PWTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVGDLVAEPLVIHG 411

Query: 119 SMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALN 178
             +      RV+   +RVGL PE    YP   + GQ+QR+C+ARAL L P +I+ADE++ 
Sbjct: 412 LASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVA 471

Query: 179 GLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVL 238
            LD+++++Q+L+L  ++Q+E GVS++++S  + V++ I+ ++ VM+ G  VE G   ++ 
Sbjct: 472 ALDVSIQAQVLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIF 531

Query: 239 ADPQHPITQRMI 250
             PQHP T++++
Sbjct: 532 ESPQHPYTKKLM 543



 Score =  121 bits (304), Expect = 3e-32
 Identities = 89/264 (33%), Positives = 140/264 (53%), Gaps = 19/264 (7%)

Query: 2   SALLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAG 61
           S+LL V +L     T +G      +  V+ +SF L  G+T+   G++GSGKS  A  L  
Sbjct: 3   SSLLSVKDLTVQVATPTG-----PKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQ 57

Query: 62  MVAP-----TGGEIRVNGE----LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEG 112
           ++        GG   ++GE    L E +    R + I MIFQ+P TSLNP + +G  L G
Sbjct: 58  LLPKPMARIAGGSATLDGEDILALPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIG 117

Query: 113 PLKR--NTSMTPEARMRRVKDTLQRVGLL-PEHAYF-YPQMLATGQKQRVCLARALILQP 168
            +    NTS    AR R   + L +V +  PE     YP  L+ G +QR+ +A AL   P
Sbjct: 118 AITAHGNTSGRRAARARAA-ELLDQVQIPEPERRLGQYPHELSGGLRQRIVIAMALAQNP 176

Query: 169 SIIIADEALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDV 228
            I+IADE    LD+ +++QIL L  +LQ + G+S + ++  +GV+  + D+++VM  G  
Sbjct: 177 KILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRT 236

Query: 229 VESGETHEVLADPQHPITQRMIES 252
           VE   + ++ A PQ   T+ ++ +
Sbjct: 237 VEHATSRDLFAHPQDAYTKELLSA 260