Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 625 a.a., peptide transport system ATP-binding ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  197 bits (502), Expect = 3e-55
 Identities = 98/254 (38%), Positives = 165/254 (64%), Gaps = 5/254 (1%)

Query: 4   LLEVTNLHKDFVTRSGFLR--KQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAG 61
           +LEV  L K F  +SG     K   HAV+ VSF+++AG+T+  +G++G GKST  R +  
Sbjct: 323 VLEVAGLTKRFEVKSGLFSTVKGCVHAVENVSFSIKAGETLALVGESGCGKSTTGRSVMR 382

Query: 62  MVAPTGGEIRVNGE---LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNT 118
           +V P+GG + ++G     L   +   +   ++MIFQDP  SLNPR+ IGT +  PL  N 
Sbjct: 383 LVEPSGGLVLLDGVDVLKLSQNELRHQRNHMQMIFQDPYASLNPRMNIGTAIAEPLLING 442

Query: 119 SMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALN 178
                    +V + LQ+VGL P+ A  +P   + GQ+QR+C+ARAL L+P +I+ADEA++
Sbjct: 443 KGGQSEVADKVAELLQKVGLSPDMAKRFPHEFSGGQRQRICIARALALEPKLIVADEAVS 502

Query: 179 GLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVL 238
            LD++++SQ++NL L+LQ  MG++++++S  + V++ ++ ++ VM+ G++VE+G    + 
Sbjct: 503 ALDVSVKSQVVNLMLDLQARMGLAYLFISHDMAVVERVSHRVAVMYLGEIVEAGSREAIF 562

Query: 239 ADPQHPITQRMIES 252
            +PQHP T+R++ +
Sbjct: 563 QNPQHPYTRRLLSA 576



 Score =  134 bits (337), Expect = 5e-36
 Identities = 80/234 (34%), Positives = 131/234 (55%), Gaps = 10/234 (4%)

Query: 29  VKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVAPTG----GEIRVNG-ELLEHKDYS 83
           V+ VSF + A +T+  +G++GSGKS  A  +  + +P G    G +++ G ELL   D  
Sbjct: 47  VQGVSFDIGARETVAVVGESGSGKSVTALSIMRLNSPRGTKIEGSVKLGGKELLSLSDAE 106

Query: 84  TRC---KLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPEARMRRVKDTLQRVGLLP 140
            R      I MIFQ+P TSLNP L IG  +   L  +  ++           L++V +  
Sbjct: 107 MRQIRGNDIAMIFQEPMTSLNPVLTIGFQIAESLILHRGLSRAQAENETIRLLEKVRIPA 166

Query: 141 EHAYF--YPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMAMRSQILNLFLELQEE 198
             + F  YP   + G +QRV +A AL  +P ++IADE    LD+ +++QIL L  ELQ+E
Sbjct: 167 AKSRFHEYPHRFSGGMRQRVMIAMALACKPKLLIADEPTTALDVTIQAQILELIKELQQE 226

Query: 199 MGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQHPITQRMIES 252
            G+S ++++  +GV+  I D+ +VM++G  VE+  T ++   P HP T+ ++ +
Sbjct: 227 DGMSVLFITHDMGVVAEIADRTVVMYKGQAVETASTDDIFNRPNHPYTRSLLSA 280