Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., oligopeptide ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

 Score =  198 bits (504), Expect = 2e-55
 Identities = 96/254 (37%), Positives = 166/254 (65%), Gaps = 5/254 (1%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQ-HAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           +LEV N+ K +   SGF  K  + HAVK +SF + AG+TIG +G++GSGKST+AR+L G+
Sbjct: 280 ILEVKNIDKFYTLSSGFFAKPARLHAVKNLSFDVAAGETIGIVGESGSGKSTVARVLLGL 339

Query: 63  VAPTGGEIRVNGE---LLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTS 119
              +GGE   +G     ++ K      + ++M+FQDP +S+NPR+ +  I+  P + +  
Sbjct: 340 NEASGGEALFHGRDVLKMDRKQLLAFRRKVQMVFQDPYSSMNPRMTVFDIVSEPWRIHKD 399

Query: 120 MTPEARMR-RVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALN 178
           +  + R R RV + L  VGL PEHA  YP   + GQ+QR+ +ARAL   P +++ DEA++
Sbjct: 400 ILEKTRWRDRVTELLGLVGLNPEHAKRYPHQFSGGQRQRIAIARALACDPELVVCDEAVS 459

Query: 179 GLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVL 238
            LD++++ Q+++L  EL++ +G+++++++  + +++H  D+IIVM  G++VE   T E+ 
Sbjct: 460 ALDVSVQVQVIDLLAELRDRLGLAYIFITHDLPIVRHFADRIIVMKSGEIVEHATTEEIF 519

Query: 239 ADPQHPITQRMIES 252
            +PQH  T+++I +
Sbjct: 520 RNPQHAYTRQLINA 533



 Score =  139 bits (350), Expect = 1e-37
 Identities = 89/261 (34%), Positives = 139/261 (53%), Gaps = 18/261 (6%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           LLEV +L  DF++  G  R     A   VSF ++AG+T+  +G++GSGKS  A  + G++
Sbjct: 6   LLEVKDLTVDFLSLGGAFR-----ATSGVSFHVDAGETLVILGESGSGKSVSASAIMGLI 60

Query: 64  APTGGEIRVNGELLEHKDYSTRC---------KLIRMIFQDPNTSLNPRLQIGTILEGPL 114
               G+I         +D S+           + I MIFQDP + LNP   IG  LE   
Sbjct: 61  DTPPGDICAGSVAYRGRDLSSLSEGERRDLNGRRIAMIFQDPLSHLNPVYTIGWQLEEVF 120

Query: 115 K-RNTSMTPEARMRRVKDTLQRVGLLPEHAYF--YPQMLATGQKQRVCLARALILQPSII 171
                +   EAR R + + L RVG+         YP   + GQ+QR+ +  A+ L+P I+
Sbjct: 121 TVHGVASGAEARQRAI-EILGRVGIPEPEKRIDQYPHQFSGGQRQRIMIGMAIALRPEIL 179

Query: 172 IADEALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVES 231
           IADE    LD+++++QIL L  +LQ E G++ + ++  + V  ++ D++IVM  G +VE 
Sbjct: 180 IADEPTTALDVSVQAQILELLKKLQAEDGLAIIMITHDLEVAANMADRVIVMKSGRIVEE 239

Query: 232 GETHEVLADPQHPITQRMIES 252
           GE   V  +P H  T+ +I +
Sbjct: 240 GEARAVFENPAHSYTRTLINA 260