Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  196 bits (499), Expect = 4e-55
 Identities = 98/251 (39%), Positives = 162/251 (64%), Gaps = 4/251 (1%)

Query: 4   LLEVTNLHKDF-VTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGM 62
           +LE   L K + V R  F      HA+  VSF L  G+T+  +G++G GKSTLAR +  +
Sbjct: 21  VLEAQGLTKRYSVARGPFKDDATVHALTDVSFRLAPGRTLAVVGESGCGKSTLARQVTLI 80

Query: 63  VAPTGGEIRVNGELLEHKDYST---RCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTS 119
             P+ G +R+NG+ +   D +      + ++++FQDP  SLNPR ++ TIL+ PL  NT+
Sbjct: 81  EEPSEGTLRINGKAVAFADEAAVKDARRSVQIVFQDPYGSLNPRWKVRTILDEPLAINTT 140

Query: 120 MTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNG 179
           +    R  +V + + RVGL PE A  YP M + GQ+QR+ +ARAL+L P +++ADE ++ 
Sbjct: 141 LGAAERREKVAEMMARVGLRPEFATRYPHMFSGGQRQRIAIARALMLNPRVVVADEPVSA 200

Query: 180 LDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLA 239
           LD+++++Q+LNL ++LQ++ GV+F+++S  + V++HI++ ++VM+ G VVE G    +  
Sbjct: 201 LDVSVQAQVLNLLMDLQQDFGVAFLFISHDLSVVRHISNDLMVMYLGRVVEMGPKEAIFG 260

Query: 240 DPQHPITQRMI 250
            P HP TQ ++
Sbjct: 261 APAHPYTQALM 271