Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 618 a.a., dipeptide ABC transporter ATP-binding protein from Pantoea sp. MT58

 Score =  199 bits (507), Expect = 9e-56
 Identities = 103/252 (40%), Positives = 160/252 (63%), Gaps = 5/252 (1%)

Query: 4   LLEVTNLHKDFVTRSGFLR--KQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAG 61
           +L+V +L   F  R G L   K   HAV+ VSF L AG+T+  +G++G GKST  R L  
Sbjct: 312 ILQVRDLVTRFDIRGGLLNRVKSRVHAVEKVSFDLYAGETLALVGESGCGKSTTGRSLLK 371

Query: 62  MVAPTGGEIRVNGELLEHKDYSTRCKL---IRMIFQDPNTSLNPRLQIGTILEGPLKRNT 118
           +VA  GG +  +G+ ++H   +    L   I+ IFQDP  SL+PRL +G  +  PL  + 
Sbjct: 372 LVASQGGTLTFDGQRIDHLSGAALAHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLVHK 431

Query: 119 SMTPEARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALN 178
           +M      +RV   L +VGLLPEHA  YP   + GQ+QR+C+ARAL L P ++IADE+++
Sbjct: 432 AMPRREAEQRVAWLLDKVGLLPEHAQRYPHEFSGGQRQRICIARALALNPKVVIADESVS 491

Query: 179 GLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVL 238
            LD+++++QI+NL L+LQ E G++F+++S  + V++ I+ ++ VM+ G +VE G    V 
Sbjct: 492 ALDVSIQAQIINLMLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEMGPRQAVF 551

Query: 239 ADPQHPITQRMI 250
             PQHP T++++
Sbjct: 552 EQPQHPYTRKLM 563



 Score =  126 bits (317), Expect = 1e-33
 Identities = 83/262 (31%), Positives = 139/262 (53%), Gaps = 27/262 (10%)

Query: 5   LEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMVA 64
           L V   H+D VT           AV+ +S  L  G+T+  +G++GSGKS  +  L  ++ 
Sbjct: 21  LNVRFQHEDTVT----------DAVRHLSLDLFRGETLALVGESGSGKSVTSLALMRLIE 70

Query: 65  PTGGEI-------RVNGELLEHKDYS------TRCKLIRMIFQDPNTSLNPRLQIGTILE 111
             GG +       R NG++L+    S       R   + MIFQ+P TSLNP   +G  + 
Sbjct: 71  QAGGIVSGEVQLRRRNGDVLDLMRASKGQMRRVRGADMAMIFQEPMTSLNPVFSVGEQIA 130

Query: 112 GPLKRNTSMTPE---ARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQP 168
             ++ +  ++     A  RR+ D L R+         +P  L+ G +QRV +A AL  +P
Sbjct: 131 ESIRLHQGLSHAGALAEARRMLD-LVRIPDAQNVLSRFPHQLSGGMRQRVMIAMALCCKP 189

Query: 169 SIIIADEALNGLDMAMRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDV 228
           +++IADE    LD+ +++QIL L   LQ+EM +  ++++  +GV+  + D++ VM+ G+V
Sbjct: 190 ALLIADEPTTALDVTIQAQILQLIRVLQKEMQMGVIFITHDMGVVAEMADRVQVMYRGEV 249

Query: 229 VESGETHEVLADPQHPITQRMI 250
           VE+    E+ + PQ P TQ ++
Sbjct: 250 VENAPVAELFSAPQQPYTQALL 271