Pairwise Alignments

Query, 262 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., peptide ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  267 bits (682), Expect = 2e-76
 Identities = 129/248 (52%), Positives = 184/248 (74%)

Query: 4   LLEVTNLHKDFVTRSGFLRKQIQHAVKPVSFTLEAGQTIGFIGQNGSGKSTLARMLAGMV 63
           LL+V +L K + T      +Q   A+ PVSF L  G+T+  +G+ GSGKSTLAR+L G  
Sbjct: 5   LLKVNDLFKRYDTGYKGFTRQYNDALAPVSFELNRGETLAIVGEAGSGKSTLARILVGAE 64

Query: 64  APTGGEIRVNGELLEHKDYSTRCKLIRMIFQDPNTSLNPRLQIGTILEGPLKRNTSMTPE 123
             +GGEI   GE L+ ++   RC+LIRMIFQDPNTSLNPRL IG +L+ PL+ NT ++ +
Sbjct: 65  PRSGGEIYFEGEALDSRNIKQRCRLIRMIFQDPNTSLNPRLTIGQLLDEPLRFNTQLSAK 124

Query: 124 ARMRRVKDTLQRVGLLPEHAYFYPQMLATGQKQRVCLARALILQPSIIIADEALNGLDMA 183
            R  +V DTL++VGLLPEH+ FYP M++ GQKQRV +ARAL+L P IIIADEAL  LD++
Sbjct: 125 ERNTQVIDTLRKVGLLPEHSDFYPHMISEGQKQRVAVARALMLNPKIIIADEALTALDLS 184

Query: 184 MRSQILNLFLELQEEMGVSFVYVSQHIGVIKHITDKIIVMHEGDVVESGETHEVLADPQH 243
           +RSQILNL L+LQ+++G+S+++VS ++ +I+H++DKI+V+H+G +VE   T ++   PQH
Sbjct: 185 VRSQILNLLLKLQKDLGLSYIFVSHNLNIIRHVSDKIMVLHKGVMVEKAPTEQIFNSPQH 244

Query: 244 PITQRMIE 251
             TQR+++
Sbjct: 245 EYTQRLVQ 252