Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 328 a.a., Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  205 bits (521), Expect = 1e-57
 Identities = 125/327 (38%), Positives = 177/327 (54%), Gaps = 11/327 (3%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKE-N 60
           P+L +  L++     +  V  VDR+S  + +GEI GLVGESGSGK++  +A++ +    N
Sbjct: 4   PVLHVEDLSVIAGHGEDEVTLVDRVSFDLAKGEILGLVGESGSGKTMACRALMRLLPSAN 63

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
            RV    +RL   DLL L     R +  R + MIFQ P + LDP   +G Q+ E I  R 
Sbjct: 64  LRVQGKALRLAGEDLLSLDEAGMRGIRGRRLGMIFQNPGSHLDPLMRIGEQIGEGI--RL 121

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            +G         + +AI +L +VGI D    + SYP+E + G  Q+ MIA+A+   P++L
Sbjct: 122 HQGASKRE---ARAKAIDVLRQVGIPDPLTRVDSYPHEFSGGMRQRAMIAVALGCNPQVL 178

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPT  +D   Q+QILRLL  +      SI++I HDL  + Q  D I VMY G+  E 
Sbjct: 179 IADEPTTALDVTVQAQILRLLLDLRDQRGLSIIMITHDLGIVAQTCDSIAVMYAGRLCEH 238

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
                ++A P+HPYTAAL+   P  S        L+++ G  P L  LP GCR  PRC  
Sbjct: 239 GNKLDLLAHPRHPYTAALIDCQPATS---AGHAMLKTIAGQPPLLDALPSGCRFNPRCLQ 295

Query: 301 AQRQCVEVPHSRWV--KNHKFSCHFPL 325
              QC  +     V  + H+ +CH+PL
Sbjct: 296 QGSQCTRLLPQMQVTAEAHRVACHYPL 322