Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 330 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  197 bits (500), Expect = 4e-55
 Identities = 118/327 (36%), Positives = 181/327 (55%), Gaps = 11/327 (3%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKE-N 60
           P+L +  +++        V  VDR+S  +++GEI GLVGESGSGK++  +A++ +    +
Sbjct: 4   PVLQVSEMSVVASHRGREVTLVDRLSFDLHQGEILGLVGESGSGKTMACRALMQLMPSPD 63

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
             V    + L ++DLL+L     R +  R + MIFQ PS+ LDP   +G Q+ E +  R 
Sbjct: 64  LHVRGGSVHLNDVDLLKLDAAGMRAMRGRRIGMIFQNPSSHLDPLMRIGEQIAEGV--RL 121

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            +G         + QAI LL +VGI D    + ++P+E + G  Q+ MIA+A+   P++L
Sbjct: 122 HQGASKRE---ARAQAIDLLRQVGIPDPASRVDNFPHEFSGGMRQRAMIAVALGCGPQVL 178

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPT  +D   Q+QILRLL  +   +  S+++I HDL  + Q  D I VMY G+  E 
Sbjct: 179 IADEPTTALDVTVQAQILRLLLDLRDRHGLSLIMITHDLGVVAQTCDSIAVMYAGRLCEH 238

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
                ++A  +HPYT  L++  P  S      + L+++PG  P L  LP GCR   RC +
Sbjct: 239 GSKRDVLARARHPYTHGLIECQPASS---AGSELLRTIPGQPPLLDALPGGCRFHARCSH 295

Query: 301 AQRQCVE-VPHSRWV-KNHKFSCHFPL 325
           A   C + +P  R +   H  +CH+PL
Sbjct: 296 AGADCPDRLPLMRPMGVAHAAACHYPL 322