Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  193 bits (491), Expect = 4e-54
 Identities = 110/308 (35%), Positives = 173/308 (56%), Gaps = 8/308 (2%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           P L++R+L     T  G++ AV  +SL +  G I GLVGESGSGKS+   +I+G+  E  
Sbjct: 16  PTLEVRNLCTSFHTRAGVLPAVRDVSLRVEPGRILGLVGESGSGKSVTGFSILGLVDEPG 75

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
           R++  ++     DL +L+  + R +    VAMIFQ+P   L+P   V  Q+IE++   + 
Sbjct: 76  RISGGQVLFKGRDLTRLSASQLRGIQGNRVAMIFQDPMMTLNPVLRVDTQMIEAVRAHSP 135

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
             R   R     + A   L  +GI   ++ + +YP++L+ G  Q+V IA+A+   P L+I
Sbjct: 136 LSRREAR-----EHASRTLALMGIASPEERLRAYPHQLSGGMRQRVAIAIALLHAPDLII 190

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D   Q+QIL  + ++ +   TS++ I HDL+ I   AD + VMY G+ VE  
Sbjct: 191 ADEPTTALDVTIQAQILSEVQKLVREQGTSLIWITHDLSVIAGLADDVAVMYAGRIVEQG 250

Query: 242 ETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYA 301
             A ++  P+HPYT  L+ ++P  +      Q+L+ +PG  P L  +P+GC    RCP A
Sbjct: 251 PVADVLDRPQHPYTQGLIDSLPSRNQ---RGQRLRQIPGMAPDLLSMPVGCAFAARCPRA 307

Query: 302 QRQCVEVP 309
            + C + P
Sbjct: 308 SQVCAQEP 315