Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like (NCBI) from Rhodospirillum rubrum S1H

 Score =  240 bits (613), Expect = 3e-68
 Identities = 134/331 (40%), Positives = 199/331 (60%), Gaps = 9/331 (2%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           M LL+I +LT+E  +     +AV+ +S +++ GE+ G+VGESGSGKS+ + A++G+    
Sbjct: 1   MSLLEIENLTVEFGSGDKPFRAVEDVSFSVDAGEVLGIVGESGSGKSVSSLAMMGLVAYP 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
            RV A +M    IDLL L+ R+RR++   DVAMIFQEP T L+P   +G Q+ E++    
Sbjct: 61  GRVKASKMVFDGIDLLTLSGRQRRKLTGSDVAMIFQEPMTSLNPCFTIGYQITETLKIHQ 120

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
              R       R+ +AI LL +VGI D    +  +P++L+ G  Q+VMIAMA+A  P+LL
Sbjct: 121 GGTR-----AQRRDRAIELLSQVGIPDPGSRLGLFPHQLSGGMSQRVMIAMAVACDPRLL 175

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPT  +D   Q+QI+ LL  + +     ++LI HDL  + + A R+ VMY GQ +E+
Sbjct: 176 IADEPTTALDVTIQAQIMHLLLTLQEKRGMGMVLITHDLAVVAEAAHRVVVMYAGQVMET 235

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
                I   P HPYTAALL+A+P+ ++    K++L ++PG +P     P GC L PRC +
Sbjct: 236 GAVPAIFDRPHHPYTAALLEALPERAE---GKRRLNTIPGVVPGAHDRPKGCLLAPRCAF 292

Query: 301 AQRQC-VEVPHSRWVKNHKFSCHFPLNMESP 330
           AQ +C  E P      + +  C FPL+   P
Sbjct: 293 AQDRCRAERPSLTPTDSGQVRCFFPLSAPDP 323