Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., dipeptide ABC transporter ATP-binding protein from Rahnella sp. WP5

 Score =  246 bits (629), Expect = 4e-70
 Identities = 138/326 (42%), Positives = 204/326 (62%), Gaps = 10/326 (3%)

Query: 3   LLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWR 62
           LL +  L++         +AVDR+S ++ +GE+ G+VGESGSGKS+ + A++G+     +
Sbjct: 15  LLTVDKLSVHFGDEGTPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLALMGLIDFPGK 74

Query: 63  VTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTFE 122
           V A+++  G  +L  ++ +ERR+++  +VAMIFQ+P T L+P   VG Q++E+I      
Sbjct: 75  VMAEKLEFGGRNLQGISEKERRQIVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGG 134

Query: 123 GRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLIA 182
            +       R+++ I LL+ VGI D    +  YP++L+ G  Q+VMIAMAIA +PKLLIA
Sbjct: 135 NK-----KTRRQRTIDLLNLVGIPDPASRLDVYPHQLSGGMSQRVMIAMAIACRPKLLIA 189

Query: 183 DEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESAE 242
           DEPT  +D   Q+QI+ LL  + Q  N +++LI HDL  + + A  I VMY GQ VESA+
Sbjct: 190 DEPTTALDVTIQAQIIELLLDLQQRENMALMLITHDLALVAEAAQHIIVMYAGQVVESAK 249

Query: 243 TAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYAQ 302
             +I   P+HPYT ALL+++P+F+     K +LQSLPG +P     P GC L PRCPYA 
Sbjct: 250 ATEIFRAPRHPYTQALLRSLPEFA---ADKARLQSLPGVVPGKYDRPNGCLLNPRCPYAT 306

Query: 303 RQC-VEVPHSRWVKNHKFS-CHFPLN 326
             C  E P  R + N + S CH+PL+
Sbjct: 307 DLCRKEEPALRDLANGRQSKCHYPLD 332