Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., ABC transporter ATP-binding protein from Rhodopseudomonas palustris CGA009

 Score =  186 bits (471), Expect = 2e-51
 Identities = 102/262 (38%), Positives = 157/262 (59%), Gaps = 5/262 (1%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           PLLD+R LT+E  T +G+VKAV  + +++ +GE   +VGESGSGKS+ + A++ I     
Sbjct: 5   PLLDVRDLTVEFVTRRGIVKAVQHVDISVGKGETLAIVGESGSGKSVTSYAVMRILDRAG 64

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
           R+    +  G +DL   +  E R +  R+++MIFQ P   L+P  +VG Q IE +  +  
Sbjct: 65  RIAEGSVMFGGMDLKAASEHEMRDLRGREISMIFQNPRAALNPIRKVGDQ-IEDVLRQHV 123

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
           +    +R     ++AIA L  V I   ++   +YP++L+ G CQ+V+IA+A+A  P+LLI
Sbjct: 124 QSTSADR----GEKAIAALEAVKIARPRERYHAYPFQLSGGMCQRVVIALALACNPQLLI 179

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D  TQ  ++ L+  + +    S +LI HDL     + DR+ VM  G+ VE+A
Sbjct: 180 ADEPTTGLDVTTQKAVMDLIVELTKSRGLSTILITHDLGLAAAYCDRVVVMEKGRVVETA 239

Query: 242 ETAKIVAEPKHPYTAALLKAMP 263
             A I A P+HPYT  L++A P
Sbjct: 240 SAADIFANPQHPYTKKLMRATP 261



 Score =  127 bits (320), Expect = 5e-34
 Identities = 82/245 (33%), Positives = 129/245 (52%), Gaps = 13/245 (5%)

Query: 21  KAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKE-NWRVTADRMRLGNIDLLQLT 79
           +AVD +S  +  GE  GLVGESG GKS  +  ++ +  + + R+  D   +G I    L 
Sbjct: 367 RAVDGISFQIGHGESVGLVGESGCGKSTTSMMLMRLLDQTSGRIVFDGEEIGTI----LP 422

Query: 80  PRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESI-PFRTFEGRWWERFTWRKKQAIA 138
            R  R  + + + M+FQ+P+  L+P     R + + I      +GR   R    +     
Sbjct: 423 QRFARLPLRKSIQMVFQDPTDSLNPRFTAARAIADPILQLGEIKGRDAVRARCEE----- 477

Query: 139 LLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLIADEPTNDVDPITQSQIL 198
           L  +VG+    D++  +P++L+ G+  +V IA AIA +PKL+I DEPT  +D   Q+ +L
Sbjct: 478 LAEQVGLP--LDLLDRFPHQLSGGQKARVGIARAIALRPKLVILDEPTAALDVSVQAVVL 535

Query: 199 RLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESAETAKIVAEPKHPYTAAL 258
            LL  + Q    S L + HDL  +    DR+ VM  G+ VE   + +++  PKH YT  L
Sbjct: 536 NLLQDLKQTLGMSYLFVSHDLNVVRLLCDRVIVMRSGRIVEQGSSEQVLGSPKHDYTREL 595

Query: 259 LKAMP 263
           L A+P
Sbjct: 596 LTAIP 600