Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., putative dipeptide transport ATP-binding protein DppD from Phaeobacter inhibens DSM 17395

 Score =  213 bits (542), Expect = 5e-60
 Identities = 117/312 (37%), Positives = 178/312 (57%), Gaps = 16/312 (5%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           P+L IR L +EI T    + A D++S  +  GEI G+VGESG+GKS+   A++G+     
Sbjct: 4   PVLSIRDLVVEIPTRHARLCATDKVSYDIAPGEILGVVGESGAGKSMAGNAVIGLLNPPA 63

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
           R+T   +RL    +  L   + RR+  +++ MIFQ+P T L+P   +G QL E++     
Sbjct: 64  RITGGEIRLNGQRIDNLPREKMRRLRGKEIGMIFQDPLTSLNPLLRIGDQLTETM----- 118

Query: 122 EGRWWERFTWRKKQA----IALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKP 177
                E     K +A    IA L +VGI    + + SYP+E + G  Q+V+IA+A+ A+P
Sbjct: 119 ----MEHLELTKPEARARAIAALEEVGIPAASERIDSYPHEFSGGMRQRVVIALALCAEP 174

Query: 178 KLLIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQS 237
            L+IADEPT  +D   Q+QI+ LL R+ +   T+++LI HD+  I + ADR+ VMY G+ 
Sbjct: 175 SLIIADEPTTALDVSVQAQIIALLKRLCRERGTAVMLITHDMGVIAEAADRVAVMYAGRM 234

Query: 238 VESAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPR 297
            E  +   +V  P+HPYT  L+ + P  S     + +L+ +PG++P L  LP GC   PR
Sbjct: 235 AEIGDVRDVVTRPRHPYTDGLMGSTPSAS---AGQHRLRQIPGAMPRLHSLPPGCAFSPR 291

Query: 298 CPYAQRQCVEVP 309
           C  A  +C   P
Sbjct: 292 CERANERCRNSP 303