Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 332 a.a., oligopeptide ABC transporter, ATP binding protein from Phaeobacter inhibens DSM 17395

 Score =  213 bits (543), Expect = 4e-60
 Identities = 119/305 (39%), Positives = 183/305 (60%), Gaps = 9/305 (2%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           P+L++R+L         L+ AV  +S  + +GE+ GLVGESGSGKS+  ++I+G+ + + 
Sbjct: 8   PVLEVRNLCTTFKRGGVLLPAVRDVSFDVRQGEVLGLVGESGSGKSVTLRSILGLTRRHG 67

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
            VT + +R    D+ +L+ R+ R+V   +VAMIFQEP T L+P   VG QL E++   T 
Sbjct: 68  EVTGE-VRWQGRDISRLSDRQLRQVRGGEVAMIFQEPMTSLNPLLTVGLQLTETLKAHTD 126

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
             R       R+ +AI +L  VGI      +  YP++ + G  Q+VMIA+A+AA+PKLL+
Sbjct: 127 LSR-----AARRNRAIEMLDHVGIPAAASRLQDYPHQFSGGMRQRVMIAIALAAEPKLLL 181

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D   Q+QIL L+ R++Q  N  ++L+ HDL  + Q  + + VMY G+ VE  
Sbjct: 182 ADEPTTALDVTIQAQILDLILRLSQEMNMGVILVTHDLGVVAQTCENVAVMYAGRIVEQG 241

Query: 242 ETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYA 301
              +++  P+HPYTA L++++P     I  +  L S+PG+ P L+ LP GC   PRC   
Sbjct: 242 AVRQVLRAPRHPYTAGLMRSVPQD---IAPRTPLYSVPGTPPSLEMLPRGCAYAPRCEVR 298

Query: 302 QRQCV 306
              C+
Sbjct: 299 TEACL 303