Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Shewanella loihica PV-4

 Score =  382 bits (982), Expect = e-111
 Identities = 188/328 (57%), Positives = 250/328 (76%), Gaps = 1/328 (0%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           MPLLDIR+LTIE+DTP G VKA++R+SLT+N GE+ GLVGESGSG++L+AKAI+GI   N
Sbjct: 1   MPLLDIRNLTIELDTPHGRVKALERVSLTLNPGEVHGLVGESGSGRTLLAKAILGIPGHN 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
           W + ADRM     +L+ ++P ERR ++  ++AMIFQ+P + LDP+  VG Q+IE++P   
Sbjct: 61  WTIQADRMMWDGQNLMDMSPSERRVLMGSEMAMIFQDPISSLDPAIAVGTQIIEAMP-EN 119

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            E  WW+R + ++K+A   LHKVGIK+ + IMSSY +EL+DGECQKVMIA+A+A +P+LL
Sbjct: 120 KELPWWKRGSDKRKKAQQWLHKVGIKETQKIMSSYAWELSDGECQKVMIAIAVANQPRLL 179

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPTN ++  TQ+QI RLLS++NQ+ N SILLI H+L T++QW DR+TVMY GQ +ES
Sbjct: 180 IADEPTNSMEVRTQAQIFRLLSKLNQLQNVSILLISHELETLSQWCDRLTVMYSGQVMES 239

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
             T+ ++A P HPYT ALL  +PD+S+   HK  +Q+LPGS P LQHLPIGCRLGPRCP 
Sbjct: 240 GVTSDVIANPYHPYTKALLDNIPDYSNPEHHKTMMQTLPGSAPALQHLPIGCRLGPRCPQ 299

Query: 301 AQRQCVEVPHSRWVKNHKFSCHFPLNME 328
           AQ+ CV  P     K+  F+CHFP + E
Sbjct: 300 AQKLCVNQPSLCHQKDRYFACHFPYHNE 327