Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., oligopeptide/dipeptide ABC transporter, ATP-binding protein from Dechlorosoma suillum PS

 Score =  200 bits (509), Expect = 7e-56
 Identities = 121/325 (37%), Positives = 178/325 (54%), Gaps = 14/325 (4%)

Query: 3   LLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWR 62
           LL +R+L         ++ AVD +S  +  GE   L+GESG GKS  A A++ +     R
Sbjct: 4   LLSVRNLKAGFLAGGRVLTAVDGVSFAVAPGETFALLGESGCGKSATALALLRLLPNAGR 63

Query: 63  VTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIP-FRTF 121
           +    + L   ++L L     R       AMIFQEP+T L+P   +GRQ+ ES+   R  
Sbjct: 64  IQGGEVWLEGEEILALPEAAMRDRRGSAAAMIFQEPATSLNPVLTIGRQIGESLERHRGM 123

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
           +G         +++A+ALL  VGI D +  +  YP++L+ G  Q+ MIA+A+A +P+LLI
Sbjct: 124 KGEA------ARREALALLTAVGIADPERRLEEYPFQLSGGMKQRAMIAIALAGEPRLLI 177

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D   Q+QIL LL+R+       +LLI HDL  + + A R+ VMY G+ VE+A
Sbjct: 178 ADEPTTALDVTIQAQILDLLARLQAERAMGMLLITHDLGVVARSAHRVGVMYAGEIVETA 237

Query: 242 ETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYA 301
              +  A P+HPYT  L  A+PD         +L ++PG +P L  +P GCR  PRCP A
Sbjct: 238 PRQEFFASPRHPYTQKLFAALPDLGQ---RGAQLATIPGQVPGLAAMPAGCRFAPRCPVA 294

Query: 302 QRQCVEVPHSRWVK---NHKFSCHF 323
             +C  +    W +    H+  CH+
Sbjct: 295 MDRC-RLESPGWTELEAGHQVRCHW 318



 Score =  159 bits (403), Expect = 1e-43
 Identities = 99/288 (34%), Positives = 147/288 (51%), Gaps = 14/288 (4%)

Query: 18  GLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWRVTADRMRLGNIDLLQ 77
           G VKAVD +SL +  G    LVGESG GK+   KA++ +      V  D   L  +   +
Sbjct: 373 GHVKAVDGVSLELQRGRTLALVGESGCGKTTAGKAVLRLLPATGSVRLDGRELLGLPERE 432

Query: 78  LTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTFEGRWWERFTWRKKQAI 137
           L P  RR      + M+FQ+P   L+P   VG  + E +          ER    +    
Sbjct: 433 LKPLRRR------MQMVFQDPFASLNPRLTVGEIIEEGMTALRVAASRDER----RAALA 482

Query: 138 ALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLIADEPTNDVDPITQSQI 197
           ALL  VG+    + +  YP+E + G+ Q++ IA A+A +P+LL+ DEPT+ +D   Q+QI
Sbjct: 483 ALLESVGLP--AEALGRYPHEFSGGQRQRIAIARALAVQPELLVCDEPTSALDVSVQAQI 540

Query: 198 LRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESAETAKIVAEPKHPYTAA 257
           L LL R+ +    + L I H+   +   A  + VMY G+ VE     +++A P HPYT A
Sbjct: 541 LNLLRRLQEELGLAYLFITHNFAVVEYLAHDVAVMYLGRIVEQGPVQQVLAAPCHPYTRA 600

Query: 258 LLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYAQRQC 305
           LL A+P+    +  ++++  LPG  P     P GC   PRC  A  +C
Sbjct: 601 LLSAVPE--PRLAGQREMVRLPGETPSPARPPQGCHFHPRCAQASERC 646