Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  204 bits (518), Expect = 4e-57
 Identities = 120/312 (38%), Positives = 174/312 (55%), Gaps = 13/312 (4%)

Query: 3   LLDIRHLTIEID-------TPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVG 55
           LLD+R L++E         TP   ++AV  +S ++  G    LVGESG GKS+ A A++ 
Sbjct: 17  LLDVRDLSVEFPGRPEADGTPGAPLRAVAGISFSIAPGGTLCLVGESGCGKSMTALALLR 76

Query: 56  ICKENWRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIES 115
           +  E  RV +  +RL   +LL L   E R V  R ++MIFQEP T L+P   VG Q+ E 
Sbjct: 77  LVPEPGRVASGSVRLEGRELLTLPEPEMRGVRGRSISMIFQEPMTSLNPVFRVGEQIAEG 136

Query: 116 IPFRTFEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAA 175
           +       R     +    +A+ LL +VGI   +     +P++++ G  Q+VMIAMA+A 
Sbjct: 137 VRLHLGLSR-----SDAAARAVDLLRQVGIPSPELRARDFPHQMSGGMRQRVMIAMALAC 191

Query: 176 KPKLLIADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCG 235
            P+LLIADEPT  +D   Q QILRL+  +      S+LLI HDL  + + AD + VMY G
Sbjct: 192 DPRLLIADEPTTALDVTIQRQILRLMRDLAAHRGASVLLITHDLGVVAETADHVAVMYAG 251

Query: 236 QSVESAETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLG 295
           + +E A      A P HPY   L++++P      P  ++L ++PG++PPL  LP GC   
Sbjct: 252 RIMEHASVGDFFARPLHPYAQGLMRSVPQAVSG-PRAERLSAIPGTVPPLWALPSGCTFR 310

Query: 296 PRCPYAQRQCVE 307
            RCP+A  +C E
Sbjct: 311 DRCPHAFARCAE 322