Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., oligopeptide ABC transporter ATP-binding protein OppD from Klebsiella michiganensis M5al

 Score =  204 bits (519), Expect = 3e-57
 Identities = 115/307 (37%), Positives = 174/307 (56%), Gaps = 9/307 (2%)

Query: 3   LLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENWR 62
           LLD++ L +   TP G V AV+ ++  +  GE  G+VGESGSGKS  A A++G+   N R
Sbjct: 19  LLDVKDLRVTFGTPDGDVTAVNDLNFNLRAGETLGIVGESGSGKSQTAFALMGLLAANGR 78

Query: 63  VTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTFE 122
           +       G   +L L  RE  ++ A  ++MIFQ+P T L+P   VG QL+E +      
Sbjct: 79  IGGSATFNGK-QILNLPERELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKAL 137

Query: 123 GRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLIA 182
            +  E F    ++++ +L  V + + +  M  YP+E + G  Q+VMIAMA+  +PKLLIA
Sbjct: 138 SKA-EAF----EESVKMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIAMALLCRPKLLIA 192

Query: 183 DEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESAE 242
           DEPT  +D   Q+QI+ LL+ + +  NT+I++I HDL  +    D++ VMY G+++E  +
Sbjct: 193 DEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGQ 252

Query: 243 TAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYAQ 302
              +  +P HPY+  LL A+P           L ++PG+ P L  LP GC   PRCP+A 
Sbjct: 253 ARDVFYQPSHPYSIGLLNAVPRLD---AEGDALLTIPGNPPNLLRLPKGCPFQPRCPHAM 309

Query: 303 RQCVEVP 309
             C   P
Sbjct: 310 EICNSAP 316