Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 337 a.a., Oligopeptide transport ATP-binding protein OppD from Enterobacter sp. TBS_079

 Score =  206 bits (524), Expect = 7e-58
 Identities = 115/304 (37%), Positives = 179/304 (58%), Gaps = 10/304 (3%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           P+L +++L +        V  +D +SLT+N GE   LVGESG GKS+ + A++G+   + 
Sbjct: 11  PVLRLQNLNVTFAGSP--VSVLDGISLTVNAGETLALVGESGCGKSITSLALMGLLPASA 68

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
           ++ +  M+    DL +L+PRE   +   ++AMIFQEP T L+P+  +G QL E++     
Sbjct: 69  QIVSGEMQFRRHDLRKLSPREYADLRGSELAMIFQEPMTSLNPAFTLGDQLSEAVMRHQK 128

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
             R         K A+ +L KV I   +  + +YP++L+ G  Q+VMIAMA+   P+LLI
Sbjct: 129 LSR-----AEAMKVALQILEKVQIPAAEMRLKAYPHQLSGGMRQRVMIAMALINHPRLLI 183

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D   Q+QIL LL+ + +   T++L+I HDL  + + A ++ VMY GQ VE  
Sbjct: 184 ADEPTTALDVTIQAQILALLNTLKEETGTAVLMITHDLGVVAEVAQQVAVMYAGQVVEQG 243

Query: 242 ETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYA 301
               I A+P+HPYT  L+ ++P        K  L ++PG++P  + +P GCR   RCP+A
Sbjct: 244 SVEAIFADPQHPYTIGLMGSIPSLG---ARKGALSTIPGAVPLPESMPKGCRFATRCPFA 300

Query: 302 QRQC 305
           Q +C
Sbjct: 301 QTRC 304