Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., oligopeptide ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  198 bits (504), Expect = 1e-55
 Identities = 115/305 (37%), Positives = 168/305 (55%), Gaps = 9/305 (2%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           PLL+++ L +  D   G + AV  +S T+  G    +VGESG GKS+ A A++G+     
Sbjct: 4   PLLEVQGLDVVFDIEAGAIHAVRDVSFTLPHGRTLCIVGESGCGKSMTALALLGLVPAPG 63

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT- 120
           RVTA R++    DL  L     R +    +AM+FQ+P T L+P   VG Q+ E++     
Sbjct: 64  RVTARRLQFDGHDLTALDENGLRALRGHHMAMVFQDPMTSLNPVFRVGDQVAEALRLHLR 123

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            +GR        ++  I L  +VGI   +     YP++L+ G  Q+VMIAMA++  P+LL
Sbjct: 124 LKGRA------AREATIELFRQVGIPSPETRYDDYPHQLSGGMRQRVMIAMALSCGPRLL 177

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPT  +D   Q QIL LLS +      S+LLI HDL  + + AD + VMY G  VE 
Sbjct: 178 IADEPTTALDVTIQGQILGLLSDIAATGRASVLLITHDLGVVAETADDVIVMYAGAIVEH 237

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
           A   ++ A P HPYT  L+++ P          +L+++ G++PPL  LP GC    RC +
Sbjct: 238 APVQELFASPLHPYTRGLMRSAPPVHG--ERSPRLEAIRGNVPPLDDLPSGCAFRDRCEH 295

Query: 301 AQRQC 305
           A  +C
Sbjct: 296 AFERC 300