Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., peptide ABC transporter substrate-binding protein from Burkholderia phytofirmans PsJN

 Score =  201 bits (510), Expect = 3e-56
 Identities = 117/324 (36%), Positives = 176/324 (54%), Gaps = 9/324 (2%)

Query: 2   PLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKENW 61
           P L +++L     T  G+ KAVD  S  +  GEI GLVGESGSGKS+   +++G+     
Sbjct: 4   PTLSVQNLRTHFFTGAGVAKAVDDTSFDVAPGEIVGLVGESGSGKSITGFSVLGLIDAPG 63

Query: 62  RVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRTF 121
           R+ A R+     DL  LTP   RR+    +AMIFQ+P   L+P   +  Q+IE++   T 
Sbjct: 64  RIVAGRVLFKGEDLTTLTPEALRRLRGNRIAMIFQDPMMTLNPVLRIDTQMIEAVQAHTR 123

Query: 122 EGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLLI 181
             +   R   R + A+A    VGI    + + +YP++L+ G  Q+V IA+A+   P+L+I
Sbjct: 124 VSKHAAR--QRARDALA---SVGIPSPDERLRAYPHQLSGGMRQRVAIAIALLHDPELII 178

Query: 182 ADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVESA 241
           ADEPT  +D   Q+QIL  + ++   ++T+++ + HDL  +   ADRI VMY G+ VE+ 
Sbjct: 179 ADEPTTALDVTIQAQILAEMQKLCARSHTAMVWVSHDLAVVAGLADRICVMYAGRVVETG 238

Query: 242 ETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPYA 301
              +I+  P+HPYT  L+ ++P+ +      + L  +PG  P    LP+GC   PRC YA
Sbjct: 239 SVDEILERPRHPYTIGLIDSLPEKA---RRGESLTQIPGMAPSALKLPVGCAFAPRCVYA 295

Query: 302 QRQCVEV-PHSRWVKNHKFSCHFP 324
              C    P       H F C  P
Sbjct: 296 TSLCRSAEPPVTGEGTHLFRCFHP 319