Pairwise Alignments

Query, 331 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., oligopeptide/dipeptide ABC transporter, ATPase subunit (RefSeq) from Shewanella sp. ANA-3

 Score =  373 bits (958), Expect = e-108
 Identities = 180/329 (54%), Positives = 248/329 (75%), Gaps = 1/329 (0%)

Query: 1   MPLLDIRHLTIEIDTPQGLVKAVDRMSLTMNEGEIRGLVGESGSGKSLVAKAIVGICKEN 60
           MPLLD+R+LTIE+DTP G V+A++++SLT+N GEI GLVGESGSG+SL+A+AI+GI   N
Sbjct: 1   MPLLDVRNLTIELDTPHGRVRALEKVSLTLNAGEIHGLVGESGSGRSLLARAILGIPGPN 60

Query: 61  WRVTADRMRLGNIDLLQLTPRERRRVIARDVAMIFQEPSTCLDPSEEVGRQLIESIPFRT 120
           W +TADRM     +L+ +T +ERR ++  D+AMIFQ+PS  LDPS+ VG QL++++P + 
Sbjct: 61  WTITADRMMWDGNNLMAMTSKERRNLMGSDMAMIFQDPSGSLDPSQTVGSQLMQAMP-KN 119

Query: 121 FEGRWWERFTWRKKQAIALLHKVGIKDHKDIMSSYPYELTDGECQKVMIAMAIAAKPKLL 180
            +  +W++    K  A   LHKVGIK+ + +M SY +EL++GECQKVMIAMAIA +P+LL
Sbjct: 120 PKAYFWQKHKHAKLTAQKWLHKVGIKNPQKVMLSYAWELSEGECQKVMIAMAIANQPRLL 179

Query: 181 IADEPTNDVDPITQSQILRLLSRMNQVNNTSILLIGHDLTTITQWADRITVMYCGQSVES 240
           IADEPTN ++  TQ+QI RLLS++NQ+ N SIL+I H+L T+ QW D ++V+YCGQ +ES
Sbjct: 180 IADEPTNSMELSTQAQIFRLLSQLNQLQNVSILIISHELETLAQWCDHLSVLYCGQVMES 239

Query: 241 AETAKIVAEPKHPYTAALLKAMPDFSDWIPHKQKLQSLPGSIPPLQHLPIGCRLGPRCPY 300
             T +++ +P HPYT ALL  MPD+S    HK  + +LPGS P LQHLPIGCRLGPRCP 
Sbjct: 240 GPTEELINQPYHPYTKALLDNMPDYSGIEAHKAIMPTLPGSAPALQHLPIGCRLGPRCPE 299

Query: 301 AQRQCVEVPHSRWVKNHKFSCHFPLNMES 329
           AQ++CV  P    +++  F+CHFP + E+
Sbjct: 300 AQKKCVNQPSLSHLRDRYFACHFPYHGET 328