Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 300 a.a., Dipeptide transport system permease protein DppC (TC 3.A.1.5.2) from Pseudomonas fluorescens FW300-N2E2

 Score =  162 bits (409), Expect = 1e-44
 Identities = 95/274 (34%), Positives = 144/274 (52%), Gaps = 5/274 (1%)

Query: 18  RFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFL 77
           R  R    N +   GL  +  + LV + +PWIA +DP + +    L     P G   ++ 
Sbjct: 27  RLLRFLLRNPMTFAGLIVVATLMLVAVFAPWIAGHDPLLQNLAGALQA---PSGV--HWF 81

Query: 78  GTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTV 137
           GTD+ GRD+ +RL+ GS  ++   +L+T+I   +G  +G ++G   G + S    I D  
Sbjct: 82  GTDEYGRDVFARLVYGSRITLYIVLLVTVIVGPIGLLVGTVSGYFGGWVDSLFMRITDIF 141

Query: 138 MSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGA 197
           +S PSL+LA+ F+A LG G  + ++AI L   P   R            D+V+A +L GA
Sbjct: 142 ISFPSLVLALAFIAALGPGLEHAVIAIALTAWPPIARLARAETLPLRNADFVVAVQLQGA 201

Query: 198 NEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVEL 257
           +   ++   I P  L  ++  +TM ++  IL   ALGFLGLGAQ+P  EWGAM+      
Sbjct: 202 SSTRIILRHIIPMCLSSVIIRLTMNMASIILTAAALGFLGLGAQAPLPEWGAMISTGRRY 261

Query: 258 IYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
           +  + W V  PG AIM   +  NL+GDG R  L+
Sbjct: 262 MLESWWLVAAPGAAIMLVSLAFNLLGDGLRDVLD 295