Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 303 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  229 bits (585), Expect = 4e-65
 Identities = 115/280 (41%), Positives = 176/280 (62%), Gaps = 1/280 (0%)

Query: 13  PTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDP-QMHSSVLLLPPSWEPEG 71
           P+ ++ FW++F  N  A+ GL  ++ I    + +PW+AP+DP + +   LL PP W   G
Sbjct: 17  PSPYKEFWQAFSKNKGAVAGLLFMILIVFCALFAPWVAPHDPSEQYRDFLLTPPVWLEGG 76

Query: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131
              + LGTD+LGRD+LSRLI GS  S+   +   +++ + G  +G LAG    +L  ++ 
Sbjct: 77  QWQFILGTDELGRDLLSRLIQGSRLSLLIGLASVVMSLIPGILLGLLAGFFPRVLGPSVM 136

Query: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMA 191
            ++D ++++PSLLLA+  VA LG G  N ++AI +  +P ++R    AV  E+ +DYV A
Sbjct: 137 RLMDIMLALPSLLLAVAIVAILGPGLINTVIAIAIVSLPSYVRLTRAAVMGELNRDYVTA 196

Query: 192 ARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAML 251
           ARL GA    L++ ++ PN +  ++ + T++ S AILD  ALGFLGLG Q P+ EWG ML
Sbjct: 197 ARLAGATLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPPTPEWGTML 256

Query: 252 GDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
             + + I  A W V+LPGL I+ +V+ INL+GDG R AL+
Sbjct: 257 ASARDYIERAWWVVSLPGLTILLSVLAINLMGDGLRDALD 296