Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  182 bits (462), Expect = 8e-51
 Identities = 102/280 (36%), Positives = 158/280 (56%), Gaps = 5/280 (1%)

Query: 12  IPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEG 71
           +P     F + F AN  A+ G   LL   L  +L+PWIAP+DP   + + +         
Sbjct: 13  LPRSRSPFLKKFLANKGAVLGAAVLLLFVLAAVLAPWIAPHDPLKANFLAV-----RKAP 67

Query: 72  TVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLN 131
           ++ Y++GTD+LGRD+ SRL+ G+  S+ A  +   IA  +G  +G LAG   G L   ++
Sbjct: 68  SLIYWMGTDELGRDLFSRLLYGARSSLLAGGVSVAIAMFIGVPLGLLAGYFGGKLDMIIS 127

Query: 132 HILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMA 191
            +++ ++S P L+LAI   AFLG    N ++AIGL+ +P F R     V +   +DY+  
Sbjct: 128 QVMEALLSCPFLVLAIALGAFLGPSLTNAMIAIGLSAMPIFARLTRGQVLSIKHEDYLEG 187

Query: 192 ARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAML 251
           AR  G  + +++   + PN++  +V + T+ ++ AIL   +L FLGLG Q PS  WG+ML
Sbjct: 188 ARAIGLPDRWIILRYVLPNVMSPLVVQATLTIASAILAEASLSFLGLGQQPPSPSWGSML 247

Query: 252 GDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
             +   +  APW    PG+AI  TV+  NL+GDG R AL+
Sbjct: 248 NTAKNFMEQAPWMSIAPGVAIYITVLCFNLLGDGLRDALD 287