Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score =  176 bits (445), Expect = 8e-49
 Identities = 95/275 (34%), Positives = 154/275 (56%), Gaps = 4/275 (1%)

Query: 20  WRSFR---ANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLL-PPSWEPEGTVDY 75
           WR+ R   A+     G   LL I L  + +PW+APYDP     +L + PP W   GT DY
Sbjct: 22  WRTLRSSFAHRGFAIGAVLLLIILLGALFAPWLAPYDPYAQDVMLRMKPPVWMANGTWDY 81

Query: 76  FLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILD 135
            LGTD LGRD LSRL+ G+  S+       LI+ ++G  +G LAG   G   + +++++ 
Sbjct: 82  VLGTDKLGRDYLSRLLYGARISLFIGFSAALISGIIGTIMGLLAGYFGGKTDALISYLIT 141

Query: 136 TVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLD 195
           T +++P +++A+   + +G     +++ +G  L  RF   V  AV    + +YV +A+  
Sbjct: 142 TRLAMPVVMIALASASLIGGSLKVVIVLLGCLLWDRFAVVVRAAVQQIRDAEYVASAQAL 201

Query: 196 GANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSV 255
           G +   +L   I PN++  ++   T+ ++ AIL  +AL FLG+G Q P   WG M+ +  
Sbjct: 202 GCSTLRILASEILPNLVGALIVVATLEMAHAILLESALSFLGVGVQPPIPSWGLMIAEGK 261

Query: 256 ELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQAL 290
             ++ +PW + +PG+A+M  V+ INLVGDG R  +
Sbjct: 262 PYMFFSPWVIAIPGVALMVLVLGINLVGDGLRDLI 296