Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., peptide ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  323 bits (829), Expect = 2e-93
 Identities = 148/286 (51%), Positives = 211/286 (73%), Gaps = 1/286 (0%)

Query: 6   IYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHS-SVLLLP 64
           IYQE+ IP+   R W++F +N  A+ GLW ++ +   T+  PW+AP+ P+  +   LLLP
Sbjct: 6   IYQEDDIPSPMRRLWQAFASNPFALAGLWVIIGLLFFTLFGPWLAPFSPEAQNPKALLLP 65

Query: 65  PSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKG 124
           PSW+P GTV++FLGTDDLGRDI SR++ G   + G ++ + + A L+G  IGA++GM KG
Sbjct: 66  PSWDPAGTVEHFLGTDDLGRDIFSRILHGVQLTFGMSLAVVITALLLGFVIGAISGMMKG 125

Query: 125 LLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEV 184
           L SS L H+LD ++SIPSLL+AI+ VA LG G  N+  A+G+AL P+F+R+++ A+H E+
Sbjct: 126 LKSSILGHLLDALLSIPSLLMAILVVAVLGPGLGNVFWAVGIALTPQFVRAIHQAIHEEL 185

Query: 185 EKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPS 244
           +K+YV AARLDGAN   + W+ I PN+  +++ + T+A+S AILDI ALGFL LGAQ+PS
Sbjct: 186 QKEYVTAARLDGANSAQIFWYVIMPNVWEVVIIQTTLAISTAILDIAALGFLNLGAQAPS 245

Query: 245 TEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQAL 290
            EWGAM+   ++ +  APWT+T+PGLAI+FTV+ +NLVGDG R AL
Sbjct: 246 PEWGAMVFQGLDNLLTAPWTMTIPGLAILFTVLAVNLVGDGLRSAL 291