Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  160 bits (405), Expect = 3e-44
 Identities = 89/263 (33%), Positives = 135/263 (51%), Gaps = 6/263 (2%)

Query: 26  NNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGTDDLGRD 85
           N +  F    L+ I    +  P+I PYDP    +   L        +  ++ GTD LGRD
Sbjct: 36  NRVTAFAFGLLVVIVFAALFGPYIVPYDPLASDTAQALKAP-----SAAHWFGTDQLGRD 90

Query: 86  ILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMSIPSLLL 145
           I SR++  +   +  AV   ++  L+GG  G  AG   G     +  I DT+M+ P  +L
Sbjct: 91  IFSRVVVATRLDLFIAVASVVLVFLMGGLAGIAAGYFGGWTDRIVGRIADTIMAFPLFVL 150

Query: 146 AIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANEFYLLWH 205
           A+  VA LG    NI++A  +   P + R      +   E  +VMAARL G +E  +L  
Sbjct: 151 AMGIVAALGNTVQNIIIATAIVNFPLYARVARAEANVRREAGFVMAARLSGNSEMSILLV 210

Query: 206 SIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIYIAPWTV 265
            I PNI+PI++ ++++ +  AIL+   L F+GLG + P+ EWG M+ +    +    W +
Sbjct: 211 HILPNIMPIMIVQMSLTMGYAILNAAGLSFIGLGVRPPTAEWGIMVAEGASFMVSGEWWI 270

Query: 266 TL-PGLAIMFTVVVINLVGDGAR 287
            L PGLA+M  V   NL+GDG R
Sbjct: 271 ALFPGLALMIAVFCFNLLGDGLR 293