Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., ABC-type dipeptide/oligopeptide/nickel transport system, permease component from Dechlorosoma suillum PS

 Score =  174 bits (442), Expect = 2e-48
 Identities = 97/272 (35%), Positives = 141/272 (51%), Gaps = 4/272 (1%)

Query: 20  WRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSSVLLLPPSWEPEGTVDYFLGT 79
           WR  R + +AM     LL I    + +PW+AP DP   S +  L P   P     + LGT
Sbjct: 27  WRQLRRDPMAMASAAVLLLIVGAAVFAPWLAPADPYKASMIKRLLPIGSP----GFLLGT 82

Query: 80  DDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKGLLSSTLNHILDTVMS 139
           D+LGRD+ SRL+ G   S+   V+  L A  +G TIG LAG   G ++  +  +LD   +
Sbjct: 83  DELGRDLFSRLMHGGRLSLLMGVVPVLAAFGIGTTIGLLAGYVGGRVNMAIMRVLDIFYA 142

Query: 140 IPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEVEKDYVMAARLDGANE 199
            PS+LLA+     LG G  N L+A+ L  +P+ +R          + DY+ AAR+ GA  
Sbjct: 143 FPSVLLAVAISGALGPGMSNSLIALTLVFVPQVVRVAESVTTQVRQLDYIEAARMSGAGA 202

Query: 200 FYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPSTEWGAMLGDSVELIY 259
           F ++   +  N+L  +    T  LS++++  + L FLGLG + P  EWG ML      IY
Sbjct: 203 FSIIRTHVLGNVLGPVFVYATGLLSVSMILASGLSFLGLGVKPPEPEWGLMLNTLRSAIY 262

Query: 260 IAPWTVTLPGLAIMFTVVVINLVGDGARQALN 291
             PW   LPG+ I  T +  NL+ D  R A++
Sbjct: 263 SNPWVAALPGVLIFVTSIAFNLLADSVRSAMD 294