Pairwise Alignments

Query, 295 a.a., peptide ABC transporter permease SapC from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella sp. ANA-3

 Score =  321 bits (822), Expect = 1e-92
 Identities = 152/286 (53%), Positives = 210/286 (73%), Gaps = 1/286 (0%)

Query: 6   IYQEEHIPTQFERFWRSFRANNLAMFGLWSLLFIALVTILSPWIAPYDPQMHSS-VLLLP 64
           IYQE+ I +   R W++F AN  A+ GLW++ F+ L+T+  P IAP+ P+      LLLP
Sbjct: 6   IYQEDQIASPMMRVWQNFSANPFALAGLWTIAFLLLLTLFGPMIAPFSPEAQDPRALLLP 65

Query: 65  PSWEPEGTVDYFLGTDDLGRDILSRLIDGSLFSIGAAVLITLIATLVGGTIGALAGMTKG 124
           PSW+P GTV +FLGTDDLGRDI SRL+ G+  + G A++I   A  +G  IG+L+GM +G
Sbjct: 66  PSWDPSGTVAHFLGTDDLGRDIFSRLLHGAHLTFGMALMIVGTALFMGFIIGSLSGMMRG 125

Query: 125 LLSSTLNHILDTVMSIPSLLLAIIFVAFLGAGEFNILLAIGLALIPRFIRSVYVAVHNEV 184
           L SS L H+LD ++SIPSLL+AI+ VA +G G  N+  A+G+AL P+F+RS++ +VH E+
Sbjct: 126 LKSSILGHLLDALLSIPSLLMAILVVAVMGPGLENVFWAVGIALTPQFVRSIHQSVHEEL 185

Query: 185 EKDYVMAARLDGANEFYLLWHSIFPNILPIIVAEITMALSIAILDITALGFLGLGAQSPS 244
           +K+YV AARLDGAN   + W+ I PN+  +++ + T+A+S AILDI ALGFL LGAQ+PS
Sbjct: 186 QKEYVTAARLDGANSLQIFWYVIMPNVWEVVIIQTTLAISAAILDIAALGFLSLGAQAPS 245

Query: 245 TEWGAMLGDSVELIYIAPWTVTLPGLAIMFTVVVINLVGDGARQAL 290
            EWGAM+   ++ +  APWTVT+PGLAI+F+V+ INLVGDG R AL
Sbjct: 246 PEWGAMVAQGMDNLLTAPWTVTIPGLAILFSVLAINLVGDGLRSAL 291