Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  166 bits (421), Expect = 6e-46
 Identities = 82/251 (32%), Positives = 143/251 (56%), Gaps = 9/251 (3%)

Query: 64  PILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYSAPIF 123
           P++ ++  VFPAT+EL T+  ++   +G+P+G LA +++G   D ++  I + GYS PIF
Sbjct: 97  PVMADIRRVFPATMELATLGTLIGAFIGVPLGVLAAVKRGSIADQVVRVIGLVGYSVPIF 156

Query: 124 WLALMMIMAFSLHFPVFPVAGRYDLLYQIDH--VTGFALIDAFLSQSPYRSQ--ALQSVI 179
           WLAL+ ++ F          GR D++Y+     VTGF L+D     S ++ Q    + V 
Sbjct: 157 WLALLALLVFYARLQWVAYPGRIDIVYEYSFTPVTGFYLLD-----SAWQGQWDVFRDVF 211

Query: 180 EHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPP 239
            H+ LP  +L       +    R+ +   + Q YI AA+ KGLS  +I+  H LRNA  P
Sbjct: 212 RHIILPASLLGYFSLAYISRMTRSFMLNELQQEYIVAARAKGLSEARIIWTHALRNAAVP 271

Query: 240 MIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANI 299
           ++    +  + +L  +++TE++F WPG+G ++ ++L N D  ++  G I++G++ +  N+
Sbjct: 272 LVTVIALSYAGLLEGSVLTETVFAWPGLGLYITNSLQNADMNAVLGGTIIIGSVFIAINL 331

Query: 300 LSDLIGAAANP 310
           LSDL+    +P
Sbjct: 332 LSDLLYRTLDP 342