Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., peptide ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  208 bits (530), Expect = 1e-58
 Identities = 112/336 (33%), Positives = 193/336 (57%), Gaps = 26/336 (7%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLI------------------GFWQ 42
           MF + + +  + I T + ++++ +S  R  P  P  L+                  GF +
Sbjct: 1   MFRFLLGRLAVLIPTFIGVSIIAFSFIRLLPGDPVALLSGERVMSPERHAEISHQLGFDR 60

Query: 43  G----WSSYLVQLMEFNFGLN-KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTL 97
                +  YL  +++ +FG +     P++ + + +FPAT+EL   A I +++VGIP G +
Sbjct: 61  PIVMQYLDYLWGVLQGDFGTSIVTKKPVIDQFMELFPATVELSLCAIIFAVVVGIPAGVV 120

Query: 98  AGMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTG 157
           A +++G   D II   ++ G+S PIFW  L++I+  S      PV+GR  L++    VTG
Sbjct: 121 AAVKRGSIFDQIIMGTALIGFSMPIFWWGLLLIIVVSGILQWTPVSGRISLMFFFPSVTG 180

Query: 158 FALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAA 217
           F L+D+ LS    +  A QS   HL LP +VL   P   +  Q R+++ EV++++Y+R A
Sbjct: 181 FMLVDSLLSG---QEGAFQSAFNHLILPTIVLGTIPLAVIARQTRSAMLEVLSEDYVRTA 237

Query: 218 KIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALAN 277
           + KGLS +++V  H LRNA+ P++   G+Q+  ML  AI+TE+IF+WPGIG+W++D++  
Sbjct: 238 RAKGLSTFRVVGIHALRNAMIPVVTTIGLQIGVMLAGAILTETIFSWPGIGKWMVDSVFR 297

Query: 278 RDFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
           RD+  IQ G++++  +++  N+  DL+    NP +R
Sbjct: 298 RDYAVIQGGLLIIAAVIMLVNLAVDLLYGLINPRIR 333