Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 325 a.a., ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  149 bits (375), Expect = 1e-40
 Identities = 88/267 (32%), Positives = 137/267 (51%), Gaps = 18/267 (6%)

Query: 47  YLVQLMEFNFGLNK-NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKW 105
           YL +L+ F+ G +   G P+   +L   P T+ L T A   +   G+ +G +A     KW
Sbjct: 72  YLWRLVRFDLGFSSIYGKPVASVILERLPPTLLLMTAALSFAFFAGLVLGVVAARGVNKW 131

Query: 106 LDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALIDAFL 165
            DT+IS + +  Y+ P FW  LM I+ FS++    P  G  D+       TG A      
Sbjct: 132 PDTLISTLGLIFYATPSFWFGLMAIVVFSVYLQWLPAGGFEDIGQA---ATGLA------ 182

Query: 166 SQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNY 225
                       +  HL LP L L L      +  MRAS+ EV+N +++R A+ KGL   
Sbjct: 183 --------RTLDIAAHLVLPALTLGLIFLAIYLRIMRASMLEVLNLDFVRTARAKGLDET 234

Query: 226 QIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQA 285
           ++V +HVLRNA+ PM+   G+Q  +ML  +++ ES+F+ PG+GR   +++  RD  ++  
Sbjct: 235 RVVVRHVLRNALLPMVTLIGLQAGTMLGGSVVVESVFSLPGLGRLAYESVVQRDLNTLLG 294

Query: 286 GVIVVGTLVLTANILSDLIGAAANPLV 312
            V V   LV+  N L DL+ A  +P +
Sbjct: 295 IVFVSALLVIAVNFLVDLLYARLDPRI 321