Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., putative D,D-dipeptide transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  155 bits (393), Expect = 1e-42
 Identities = 75/249 (30%), Positives = 138/249 (55%), Gaps = 5/249 (2%)

Query: 64  PILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYSAPIF 123
           P++ +L  VFPAT+E+ T+  ++ +++G+P+G  A  RQG W+D II   ++ GYS P F
Sbjct: 137 PVVSDLARVFPATLEMATLGILIGVILGVPMGVWAAARQGTWVDQIIRVFALLGYSVPAF 196

Query: 124 WLALMMIMAFSLHFPVFPVAGRYDLLYQ--IDHVTGFALIDAFLSQSPYRSQALQSVIEH 181
           WL L+ +  F          GR D+ Y   ID VTG  L+D+ L      ++   + + H
Sbjct: 197 WLGLVGLAVFYAGLGWVAGPGRVDIFYDGLIDPVTGLLLVDSLLVGD---TEVFWNALSH 253

Query: 182 LTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPPMI 241
           L LP  +L       +    R+ + + ++Q +I  A++KG+  ++++  H  +    P+I
Sbjct: 254 LVLPAAILGFFSLAYIARMTRSFMLDQLSQEFITTARVKGVPEWKVIWVHGFKPIRVPLI 313

Query: 242 PKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANILS 301
              G+  +++L  +++ E++F+WPGIG +L  AL N D  ++    +V+G + +  N +S
Sbjct: 314 TVIGLSYAALLEGSVMIETVFSWPGIGNYLTVALLNADMNAVLGSTLVIGAVFIFINKIS 373

Query: 302 DLIGAAANP 310
           D++    +P
Sbjct: 374 DVLYRVLDP 382