Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 352 a.a., putative dipeptide transport system permease protein from Phaeobacter inhibens DSM 17395

 Score =  153 bits (387), Expect = 5e-42
 Identities = 82/267 (30%), Positives = 141/267 (52%), Gaps = 6/267 (2%)

Query: 47  YLVQLMEFNFGLNK-NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKW 105
           Y+  ++  +FG +      +  ++  VFPAT EL TI      ++G+P+G +A +R+G W
Sbjct: 86  YVTDVLRGDFGTSLLTARDVSTDIARVFPATFELATIGIFFGCILGVPLGVIAAVRRGSW 145

Query: 106 LDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQ--IDHVTGFALIDA 163
           +D I   I++ GYS PIFWL LM ++ F          GR  + Y+  I  VTG  L+D+
Sbjct: 146 IDQIARVIALVGYSMPIFWLGLMGLLLFYGILGWVGGPGRQGIFYEDMIPSVTGMILLDS 205

Query: 164 FLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLS 223
            ++       A +    H+ LP  +L       +    R+ + E ++  Y+  A++KG+S
Sbjct: 206 LIAGD---WGAFRDAFSHIVLPAALLGYYSLAYISRMTRSFMLEQLSAEYVTTARVKGMS 262

Query: 224 NYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSI 283
            + +V  H  RN    +I    +  +++L  +++TE IF+WPGIG ++  AL + D  ++
Sbjct: 263 EWAVVWTHAFRNIRVQLITVIALSYANLLEGSVLTEIIFSWPGIGSYITTALLSADMNAV 322

Query: 284 QAGVIVVGTLVLTANILSDLIGAAANP 310
             G +VVG + +  NI SDL+    +P
Sbjct: 323 LGGTVVVGLVFICLNIFSDLLYKVFDP 349