Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., peptide ABC transporter permease SapB from Pantoea sp. MT58

 Score =  342 bits (876), Expect = 9e-99
 Identities = 161/321 (50%), Positives = 239/321 (74%), Gaps = 1/321 (0%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIGFWQGWSSYLVQLMEFNFGLNK 60
           M +Y +R+  L +ITL +L++V +SL+ F P++P         W  +   +++F+FG++ 
Sbjct: 1   MIIYILRRLLLLLITLFLLSLVSFSLSYFTPNAPLEGAALSDAWWFWFKGMLQFDFGVSS 60

Query: 61  -NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTIISFISMSGYS 119
            NG  I  +L  VFPAT+ELC +AF+ +LLVGIP+G  AG+ + KW D  IS +++ G+S
Sbjct: 61  TNGQEIGLQLREVFPATMELCILAFLFALLVGIPLGICAGVMRNKWQDKTISALALIGFS 120

Query: 120 APIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALIDAFLSQSPYRSQALQSVI 179
           APIFWLAL++ + FSL     PV+GR+DLLY + +V+GFALIDA+LS+SP+R + + SV+
Sbjct: 121 APIFWLALILTLFFSLTLGWLPVSGRHDLLYPVQNVSGFALIDAWLSRSPWRHEMIISVL 180

Query: 180 EHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIVTQHVLRNAIPP 239
            HL LP LVLA+APTT+VI  +R S ++VM++NY++AA  +GLS + ++ +HVL NA+PP
Sbjct: 181 SHLILPVLVLAMAPTTEVIRLLRNSTSDVMDKNYVKAAATRGLSRFTVIRRHVLHNALPP 240

Query: 240 MIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVIVVGTLVLTANI 299
           +IP+ G+Q S+MLTLA+ITE +FNWPG+GRWL++A+  +D+ +I AGV+V+G LV+  N+
Sbjct: 241 VIPRLGLQFSTMLTLAMITEMVFNWPGLGRWLINAIRQQDYAAISAGVMVIGGLVILVNV 300

Query: 300 LSDLIGAAANPLVRKEWYVKR 320
           +SD+IGAA NPL  KEWY  R
Sbjct: 301 ISDVIGAAMNPLKHKEWYAVR 321