Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 314 a.a., nickel ABC transporter permease subunit NikB from Klebsiella michiganensis M5al

 Score =  137 bits (345), Expect = 3e-37
 Identities = 78/272 (28%), Positives = 138/272 (50%), Gaps = 32/272 (11%)

Query: 44  WSSYLVQLMEFNFGLN-KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQ 102
           + S+L + ++ +FG++     P+L ++L   PAT++L   A +L LL  +P+G  A   +
Sbjct: 68  YGSWLWRALQLDFGVSFATQRPVLDDMLSFLPATLQLAGAALVLILLTSVPLGIWAARHR 127

Query: 103 GKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFALID 162
            +  D I+  I+  G S P FWLA +++M FS++    P  G                  
Sbjct: 128 DRLPDFIVRIIAFLGVSMPNFWLAFLLVMFFSVYLQWLPAMG------------------ 169

Query: 163 AFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGL 222
                             H+ LP + +A          +RAS+ EV  Q ++  A+++GL
Sbjct: 170 -------------YGGWRHIILPAVSIAFMSLAINARLLRASMLEVAGQRHVTWARLRGL 216

Query: 223 SNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMS 282
           +  Q   +H+LRNA  PMI   G+ +  ++   +I E+IF WPG+GR+ + A+ NRD+  
Sbjct: 217 NAKQTERRHILRNASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPV 276

Query: 283 IQAGVIVVGTLVLTANILSDLIGAAANPLVRK 314
           IQ   +++  + +  N++ DL+ AA +P +R+
Sbjct: 277 IQCFTLMMVIVFVVCNLMVDLLNAALDPRIRR 308