Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., ABC transporter permease from Klebsiella michiganensis M5al

 Score =  147 bits (372), Expect = 3e-40
 Identities = 89/316 (28%), Positives = 161/316 (50%), Gaps = 27/316 (8%)

Query: 13  IITLLILTMVGYSLARFDPHSP-----------------WTLIGFWQGWSS----YLVQL 51
           +ITL  L ++ +++ R  P  P                 +  +GF +  ++    Y V L
Sbjct: 23  VITLFGLLLLTFTIGRVMPIDPVLAIVGPDADQSTYQQVYQQLGFDKSLTTQFGIYFVNL 82

Query: 52  MEFNFG-LNKNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAGMRQGKWLDTII 110
           +  + G     G P++ +++ VFPAT+EL T+A ++   +GIP+G LA  R+    D ++
Sbjct: 83  LHGDLGNALLTGKPVVDDIIRVFPATMELATMAILVGAGLGIPLGVLAAARRNSISDYVV 142

Query: 111 SFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQ--IDHVTGFALIDAFLSQS 168
             IS++GYS PIFW+ +M ++ F         AGR DL     +   TG   +DA L+ +
Sbjct: 143 RIISLAGYSTPIFWVGMMGLLLFYAWLGWVGGAGRVDLGLDGIVPRRTGLMTVDALLAGN 202

Query: 169 PYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKIKGLSNYQIV 228
               Q   + I HL LP  +L       +    R+ +   ++Q +I  A++KGL+  Q++
Sbjct: 203 ---GQVFWNAINHLILPASLLGFHSLAYISRMTRSFMLAQLSQEFIITARVKGLTERQVI 259

Query: 229 TQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRDFMSIQAGVI 288
             H  RN +  ++    +   ++L  A++ E++F+WPG G +L  +L   D  ++   V+
Sbjct: 260 WNHAFRNILVQLLTVVALAYGALLEGAVLIETVFSWPGFGSYLTGSLLLGDMNAVMGCVL 319

Query: 289 VVGTLVLTANILSDLI 304
           +VG + +  N+LSD++
Sbjct: 320 LVGVIFVMLNLLSDML 335