Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., Dipeptide transport system permease protein DppB from Enterobacter sp. TBS_079

 Score =  204 bits (520), Expect = 2e-57
 Identities = 109/339 (32%), Positives = 188/339 (55%), Gaps = 29/339 (8%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIG--------------------- 39
           M  + +R+  L I T + +T++ ++     P  P  ++                      
Sbjct: 1   MLQFILRRLGLVIPTFIGITLLTFAFVHMIPGDPVMIMAGERGISPERHAQLLAELGLNK 60

Query: 40  -FWQGWSSYLVQLMEFNFGLN-KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTL 97
             WQ + +Y+  ++  + G++ K+ +P+  E +  F AT+EL   A I +  VGIP+G L
Sbjct: 61  PLWQQYLNYIWGVLHGDLGISLKSRLPVWDEFVPRFKATLELGVCAMIFATAVGIPVGVL 120

Query: 98  AGMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDH--- 154
           A +++G   D     ++++GYS PIFW  +M+IM  S+   + PV+GR   +  +D    
Sbjct: 121 AAVKRGSIFDHTAVGLALTGYSMPIFWWGMMLIMLVSVQLNLTPVSGRVSDMVFLDDTNP 180

Query: 155 VTGFALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYI 214
           +TGF LID  +             + H+ LP +VL   P   ++   R+S+ EV+ ++YI
Sbjct: 181 LTGFMLIDTAIWGEEGN---FIDAVAHMILPAMVLGTIPLAVIVRMTRSSMLEVLGEDYI 237

Query: 215 RAAKIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDA 274
           R A+ KGL+  +++  H LRNA+ P++   G+Q+ ++L  AI+TE+IF+WPG+GRWL+DA
Sbjct: 238 RTARAKGLTRMRVIIVHALRNAMLPVVTVIGLQVGTLLAGAILTETIFSWPGLGRWLIDA 297

Query: 275 LANRDFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
           L  RD+  +Q GV++V T+++  N+L DL+    NP +R
Sbjct: 298 LQRRDYPVVQGGVLLVATMIILVNLLVDLLYGVVNPRIR 336