Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 327 a.a., ABC transporter permease from Ralstonia sp. UNC404CL21Col

 Score =  148 bits (374), Expect = 2e-40
 Identities = 86/274 (31%), Positives = 149/274 (54%), Gaps = 16/274 (5%)

Query: 41  WQGWSSYLVQLMEFNFGLN-KNGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTLAG 99
           W+ + ++L   +  N G +     P +  +L   PAT+EL   A I++++VG+P+G  AG
Sbjct: 61  WEQYLAFLNGALHGNLGKSFVYNEPAIQLILQRLPATLELAFSALIIAVVVGVPLGLFAG 120

Query: 100 MRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTGFA 159
           +     +  ++   S+ G+S P FW+ LM+IMAFS+     P +GR +          + 
Sbjct: 121 LYPRHPVSRLLMTGSVVGFSLPTFWVGLMLIMAFSVSLGWLPASGRGETARLFGIEWSWL 180

Query: 160 LIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAAKI 219
            +D                + HL LP + L+L   + V+    A V EV+ Q++++ A+ 
Sbjct: 181 TVDG---------------LRHLVLPAVNLSLFKLSLVLRLTSAGVREVLPQDFVKFARA 225

Query: 220 KGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALANRD 279
           KGLS  ++V  HVLRN + P++   G++L S +  A++TESIF WPG G+ +LD++ + D
Sbjct: 226 KGLSPLRVVLAHVLRNTLIPLVTVLGLELGSTIAFAVVTESIFAWPGAGKLILDSINSLD 285

Query: 280 FMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
              I + +IVV  L ++ N++ D++    +P VR
Sbjct: 286 RPVIVSYLIVVVCLFVSLNLIVDILYRLLDPRVR 319