Pairwise Alignments

Query, 320 a.a., antimicrobial peptide ABC transporter permease SapB from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., dipeptide transport system permease protein from Paraburkholderia bryophila 376MFSha3.1

 Score =  219 bits (559), Expect = 6e-62
 Identities = 114/336 (33%), Positives = 189/336 (56%), Gaps = 26/336 (7%)

Query: 1   MFVYTVRKFNLFIITLLILTMVGYSLARFDPHSPWTLIGFWQGWSSYLVQLMEFNFGLNK 60
           MF + +R+  + I T + +T++ ++L    P  P  ++   +G    +        GL++
Sbjct: 1   MFRFVLRRIGMVIPTFIGITILAFALIHLIPGDPIEVMMGERGVDPAMHAAAMHRLGLDE 60

Query: 61  -----------------------NGVPILHELLVVFPATIELCTIAFILSLLVGIPIGTL 97
                                      ++ E L  FPAT+EL   A + +L+VG+P G  
Sbjct: 61  PLPMQYVHYIGRALHGDLGTSIITNTSVMGEFLARFPATVELSICAMLFALIVGLPAGVF 120

Query: 98  AGMRQGKWLDTIISFISMSGYSAPIFWLALMMIMAFSLHFPVFPVAGRYDLLYQIDHVTG 157
           A +R+G  +D  +   +++GYS PIFW  L++IM FS+     PV+GR  + Y I HVTG
Sbjct: 121 AALRRGTAVDHGVMGTALTGYSMPIFWWGLILIMVFSVKLGWTPVSGRIAVEYDIPHVTG 180

Query: 158 FALIDAFLSQSPYRSQALQSVIEHLTLPCLVLALAPTTQVIGQMRASVAEVMNQNYIRAA 217
           F L+DA +S       A +S + HL LP +VL   P   V    R+S+ EV+ ++YIR A
Sbjct: 181 FMLVDAMMSTD---EGAFKSALSHLILPAIVLGTIPLAVVARMTRSSMLEVLREDYIRTA 237

Query: 218 KIKGLSNYQIVTQHVLRNAIPPMIPKFGVQLSSMLTLAIITESIFNWPGIGRWLLDALAN 277
           + KGLS  +++  H LRNA+ P++   G+Q+ ++L  A++TE++F+WPGIG+WL+DA+  
Sbjct: 238 RAKGLSPGRVIVVHALRNALIPVVTVIGLQVGTLLAGAVLTETLFSWPGIGKWLIDAIGR 297

Query: 278 RDFMSIQAGVIVVGTLVLTANILSDLIGAAANPLVR 313
           RD+  +Q G++++ TLV+  N++ DL+    NP +R
Sbjct: 298 RDYPVVQGGILMIATLVIFVNLVVDLLYGVLNPRIR 333