Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., extracellular solute-binding protein, family 5 from Pseudomonas syringae pv. syringae B728a

 Score =  348 bits (892), Expect = e-100
 Identities = 185/509 (36%), Positives = 284/509 (55%), Gaps = 1/509 (0%)

Query: 29  IRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWTVN 88
           + +   V C E++P  F+       +T+DA    I   L+   P T   V  LA SW ++
Sbjct: 21  VSAKPLVVCTEASPEGFDIVQYTTAVTADASAETILERLVAFTPSTTDTVPGLAESWDIS 80

Query: 89  STGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWFKG 148
             GL Y FKLR  V FQTT +F PTR +NADDVV+SF+R +DP +P+H +    YP+F+ 
Sbjct: 81  PDGLTYTFKLRKGVKFQTTDYFKPTREMNADDVVWSFKRQLDPKHPWHALSLVGYPYFES 140

Query: 149 IDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKLDN 208
           + FQNLL DV  +DD TVKF L+ P++ FL ++A     I S EYA+QL+  ++  +L++
Sbjct: 141 MGFQNLLKDVEKVDDSTVKFTLAHPESPFLRDLAMPFTSIYSAEYADQLLKSNKTAELNS 200

Query: 209 LPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECDVL 268
            P+GTGPF L  Y     +R K +P YW+G    E ++F I+      L KL  NEC V 
Sbjct: 201 KPIGTGPFILTRYAKDAQVRYKANPNYWKGKVPSEALIFAITLDNNTRLQKLKANECQVA 260

Query: 269 NAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNILDS 328
             P    +  I+ +P++ +    +M  +++A+NT H  L+D RVR+A+N A ++++ + +
Sbjct: 261 LYPKPDDIANIKADPNLKIDEMESMMTSYLAMNTSHKYLSDVRVRQAINLAFDKKSYIRA 320

Query: 329 VY-YGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEPKA 387
           ++  G  +      PPT   Y   +    YD + A+ALL+EAG   G   T+        
Sbjct: 321 LFGEGKATEGVGPYPPTMMGYDTASKSPAYDPDKARALLKEAGVPEGQVFTLFARNGGAV 380

Query: 388 YNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDNFL 447
            NP+P   A+++Q+++A +G+ + +   +  E  + +     D+  +GW GD GDPDNFL
Sbjct: 381 TNPNPMVGAQMLQSDMAKVGIKIDIRIMEWGEMLKRAKNGEHDMVFAGWAGDNGDPDNFL 440

Query: 448 RPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIPLA 507
            P LSCD+ + G N + WC++ F+  +  A +  +P  R  LY QAQ + NQE P I LA
Sbjct: 441 TPNLSCDAAKNGENYARWCNNAFEDAITQARKITEPAERAALYKQAQQVFNQEQPWISLA 500

Query: 508 HGIQFTAYSKSLTGIRISPFNVQPFNTVE 536
           +   F A  K + G +ISP     F T +
Sbjct: 501 YPKLFVAMRKDVEGFKISPLTNNNFATTQ 529