Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., peptide ABC transporter substrate-binding protein from Klebsiella michiganensis M5al

 Score =  349 bits (896), Expect = e-100
 Identities = 187/511 (36%), Positives = 286/511 (55%), Gaps = 2/511 (0%)

Query: 27  SKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSWT 86
           S I +   VYC E +P  FNPQL  +  + DA    +YN L+     T   V SLA SW 
Sbjct: 19  SAISAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPVYNRLVDFKAGTTELVPSLAESWE 78

Query: 87  VNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPWF 146
           V+  G  Y+F LR  V FQ+  +F P+R  NADDV+FSF R  DP +PYH +    Y  F
Sbjct: 79  VSEDGKVYIFHLRKGVKFQSNKYFKPSRDFNADDVIFSFMRQKDPQHPYHNISSGNYSNF 138

Query: 147 KGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEKL 206
           + ++F  L+  +   D+ TV+F L+  +  F++++A   A ILS EYA+ ++     E++
Sbjct: 139 ESLEFGQLITAIDKPDEYTVRFTLAHAEAPFVADLAWYFASILSAEYADAMLKAGTPERV 198

Query: 207 DNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNECD 266
           D  P+GTGPF LA+Y     I     P+YW+G A +++++F I+   +   AKL +NEC 
Sbjct: 199 DMDPIGTGPFKLAQYQKDSRILFTAFPEYWQGKAHIDRLIFSITPDASVRYAKLEKNECQ 258

Query: 267 VLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNIL 326
           V+  P  + LP +++N  I L +   +N  F+A NTQ   L++ +VR+AL  AIN+  I+
Sbjct: 259 VMPFPNPADLPRMKENKAINLMSKAGLNTGFLAFNTQKAPLDNVKVRQALAMAINKPAII 318

Query: 327 DSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTM-SVPVEP 385
           ++V++GTG+ A  +LPP  W+         YD   A+ALL E+G A  + + + ++PV+ 
Sbjct: 319 EAVFHGTGTAAKNLLPPGVWSANSQLKDYEYDPQKAKALLAESGVAGPISIDLWAMPVQ- 377

Query: 386 KAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDN 445
           + YNP+ ++ AE+IQA+ A IGV  ++ + +  E  +          L GWT  TGDPDN
Sbjct: 378 RPYNPNAKRMAEMIQADWAKIGVQTKITTYEWGEYLKRVKDGEHQAALMGWTTATGDPDN 437

Query: 446 FLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIP 505
           F  PL +C S   G N + WC   FD ++  A      + R  LY QAQ +++ + P + 
Sbjct: 438 FFGPLFTCQSANGGSNSAKWCYQPFDKIIAEAKSITDRQKREALYLQAQQMMHDQMPAVM 497

Query: 506 LAHGIQFTAYSKSLTGIRISPFNVQPFNTVE 536
           +AH   F    K+++G  I PF    F  V+
Sbjct: 498 IAHSTIFEPVRKNVSGYEIDPFGKHIFYQVD 528