Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., peptide ABC transporter substrate-binding protein SapA from Klebsiella michiganensis M5al

 Score =  430 bits (1106), Expect = e-125
 Identities = 226/515 (43%), Positives = 307/515 (59%), Gaps = 1/515 (0%)

Query: 26  HSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTLLTIDPETHLPVASLASSW 85
           H+ IR SGFVYC      TFNPQ   + +  D L  Q+Y+ LL +DP T+  V  LA SW
Sbjct: 28  HADIRDSGFVYCVSGQVNTFNPQKVSSGLIVDTLAAQLYDRLLDVDPYTYRLVPELAESW 87

Query: 86  TVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRRIIDPTNPYHKVGQTQYPW 145
            V   G  Y F LR +V FQTT WF PTR  NADDV+F+F RI +  +P+H V  + +P+
Sbjct: 88  EVLDNGATYRFHLRNNVPFQTTAWFKPTRNFNADDVIFTFGRIFNRDHPWHNVNGSSFPY 147

Query: 146 FKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAVILSLEYANQLIIDDEKEK 205
           F  + F + +  V  LD  +V+F L RPD SFL ++AT +A ++S EYA +L   D +E 
Sbjct: 148 FDSLQFADSVESVRKLDSHSVEFRLKRPDASFLWHLATHYASVMSAEYAAKLAQSDRQEM 207

Query: 206 LDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVFDISQRGTGMLAKLLRNEC 265
           +D  P+GTGPF LAEY     IRL+RHP YW G   + QVV D+   GTG L+KLL  EC
Sbjct: 208 IDRQPVGTGPFQLAEYRSGQYIRLQRHPAYWRGKPLMPQVVVDLGSGGTGRLSKLLTGEC 267

Query: 266 DVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPALNDNRVRKALNFAINRQNI 325
           DVL  P +SQL  +  +P + L   P MN+A++A NT  P L++  VR AL  AIN Q +
Sbjct: 268 DVLAWPAASQLSILRDDPRLRLTLRPGMNIAWLAFNTAKPPLDNPEVRHALALAINNQRL 327

Query: 326 LDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLREAGFATGLELTMSVPVEP 385
           + S+YYGT   A ++LP  SWAY  +     Y+   A+A L+  G    L L + VP   
Sbjct: 328 MQSIYYGTAETAASMLPRASWAYDNEARITEYNPTEARARLKALGLEK-LTLKLWVPTSS 386

Query: 386 KAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRNNIDLYLSGWTGDTGDPDN 445
           +A+NPSP KTAELIQA++A IGV + ++  +   ++   +  N DL LSGW  D+ DPD+
Sbjct: 387 QAWNPSPLKTAELIQADMAQIGVKVIIMPVEGRFQEARLMDMNHDLTLSGWATDSNDPDS 446

Query: 446 FLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRLNLYHQAQNILNQEFPVIP 505
           F RPLLSC +  +  N + WC  +FD +L  AL + +   R+  Y +AQ IL  E PV+P
Sbjct: 447 FFRPLLSCAAIASQTNYAHWCHREFDEVLQKALTSQQLASRIEAYKEAQRILADELPVLP 506

Query: 506 LAHGIQFTAYSKSLTGIRISPFNVQPFNTVERVAE 540
           LA  ++  AY   + G+ +SPF    F  V R  E
Sbjct: 507 LASSLRLQAYRYDMKGLVLSPFGNASFAGVSREKE 541