Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Periplasmic dipeptide transport protein from Enterobacter sp. TBS_079

 Score =  368 bits (945), Expect = e-106
 Identities = 198/534 (37%), Positives = 301/534 (56%), Gaps = 11/534 (2%)

Query: 4   LLRFTLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQI 63
           L   TL L ++T+          S + +   VYC E +P  FNPQL  +  + DA    +
Sbjct: 5   LTMLTLALAALTV---------SSTVAAKTLVYCSEGSPENFNPQLYTSGTSVDASAVPV 55

Query: 64  YNTLLTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVF 123
           YN L+     T   V SLA  W V+  G  Y F LR  V FQ+   F PTR  NADDV+F
Sbjct: 56  YNRLVDFRAGTTELVPSLAERWEVSEDGKVYTFHLRKGVKFQSNKSFRPTRDFNADDVIF 115

Query: 124 SFRRIIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIAT 183
           SF R  D  +PYH V    Y  F+ ++F +L+  +  +D+ TV+F L+ P+  F++++A 
Sbjct: 116 SFMRQKDVNHPYHNVSNGSYSNFESLEFGSLITAIDKVDEHTVRFTLAHPEAPFVADLAW 175

Query: 184 SHAVILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVE 243
             A ILS EYA+ ++     EK+D  P+GTGPF LA+Y     I     P+YW+G +K++
Sbjct: 176 YFASILSAEYADAMLKAGTPEKVDMDPIGTGPFKLAQYQKDSRILFTAFPEYWQGKSKLD 235

Query: 244 QVVFDISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQ 303
           ++VF I+   +   AK+ +NEC V+  P  + LP ++ N DI L +   +N  F+A NTQ
Sbjct: 236 RLVFSITPDASVRFAKIEKNECQVMPFPNPADLPRMKANKDINLMSKAGLNTGFLAFNTQ 295

Query: 304 HPALNDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQ 363
            P L++ +VR+AL+ AIN+  I+D+V++GTG+ A  +LPP  W+   +     YD   A+
Sbjct: 296 KPPLDNVKVRQALSMAINKPAIIDAVFHGTGTAAKNLLPPGVWSADSELKDYDYDPEKAK 355

Query: 364 ALLREAGFATGLELTM-SVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQE 422
           ALL+EAGFA G+ + + ++PV+ + YNP+ ++ AE+IQA+ A +GV +++++ +  E  +
Sbjct: 356 ALLKEAGFANGISIDLWAMPVQ-RPYNPNAKRMAEMIQADWAKVGVQIKIVTYEWGEYLK 414

Query: 423 LSIRNNIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANK 482
                     L GWT  TGDPDNF  PL +C S   G N + WC   FD ++  A     
Sbjct: 415 RVKGGEHQAALMGWTTATGDPDNFFGPLFTCTSANGGSNSAKWCYKPFDKIIAEAKSITD 474

Query: 483 PRYRLNLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPFNVQPFNTVE 536
              R+ LY +AQ +++ + P + +AH   F    K +TG  I PF    F  V+
Sbjct: 475 HDKRVALYKEAQQMMHDQMPAVMIAHSTIFEPVRKEVTGYEIDPFGKHLFWQVD 528