Pairwise Alignments

Query, 540 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., acetate kinase (RefSeq) from Shewanella sp. ANA-3

 Score =  402 bits (1033), Expect = e-116
 Identities = 218/520 (41%), Positives = 311/520 (59%), Gaps = 6/520 (1%)

Query: 8   TLGLCSMTLLAGCGENIDHSKIRSSGFVYCGESAPTTFNPQLADNDITSDALGPQIYNTL 67
           T   C   LL  CG      +   SG VYC E  P +FNPQL  +  T DA   QIY+ L
Sbjct: 12  TAVFCMSGLLVACGP-----QRLPSGLVYCSEGNPESFNPQLVTSGTTIDATSHQIYSRL 66

Query: 68  LTIDPETHLPVASLASSWTVNSTGLEYVFKLRPDVAFQTTPWFSPTRPLNADDVVFSFRR 127
           +  D  +   V +LA+SW  +  GL Y F LR +V FQ +  F+P+R  NADDV+FSF R
Sbjct: 67  VDYDALSGQLVPALATSWAESDDGLSYRFTLRENVKFQHSSRFTPSRDFNADDVLFSFNR 126

Query: 128 IIDPTNPYHKVGQTQYPWFKGIDFQNLLVDVSALDDLTVKFVLSRPDNSFLSNIATSHAV 187
           IID  +PYH V +T YP+F+ I F   +  V  ++D  V F L+R D SFLSN+AT  AV
Sbjct: 127 IIDKHHPYHGVSRTGYPFFQSIGFSEQVKSVEKINDHEVIFRLARKDASFLSNLATDFAV 186

Query: 188 ILSLEYANQLIIDDEKEKLDNLPLGTGPFYLAEYHPRDLIRLKRHPQYWEGAAKVEQVVF 247
           ILS EYA+Q +     E LD+  +GTGPF L  Y   + IR +R+P +W   AKV+ +V+
Sbjct: 187 ILSSEYADQQLALGHPENLDHFAIGTGPFTLVHYAKNEYIRYRRNPDFWGEPAKVDMLVY 246

Query: 248 DISQRGTGMLAKLLRNECDVLNAPISSQLPAIEKNPDIVLQTTPAMNVAFIAVNTQHPAL 307
           DI+ + T  LAKL+  +C V   P + +LP I+++  + +++ P +NVAF A NTQ P L
Sbjct: 247 DITPKSTVRLAKLIAGDCSVSALPKAGELPVIKQHEQLNIESQPGLNVAFWAFNTQKPPL 306

Query: 308 NDNRVRKALNFAINRQNILDSVYYGTGSIAFTILPPTSWAYQQDTAQIRYDRNYAQALLR 367
           +D RVR+AL +A+++QNIL +VY  T   A  +LPP SWAY  +   + Y+   A+ LL+
Sbjct: 307 DDVRVRRALAYAVDKQNILRAVYQNTAIEAIGVLPPASWAYDSNKKLLDYNPQKARDLLK 366

Query: 368 EAGFATGLELTMSVPVEPKAYNPSPRKTAELIQANLADIGVTLRLISEDRSERQELSIRN 427
           EAG         ++PV  +AYNP+  KTAELIQ++LA+IGV + +IS D S   +   R+
Sbjct: 367 EAGIKHLSIDIWAMPV-ARAYNPNALKTAELIQSDLANIGVKVNIISYDWSVFSQRLSRD 425

Query: 428 NIDLYLSGWTGDTGDPDNFLRPLLSCDSNRAGLNVSMWCDSDFDFLLDLALEANKPRYRL 487
             D  L GW  D  DPDNF  PLLSC + ++  N S WC+ +FD +LD A E +    R 
Sbjct: 426 EYDSVLIGWNADNSDPDNFFTPLLSCSAMQSNNNRSRWCNKEFDAILDRAREVSTQAERK 485

Query: 488 NLYHQAQNILNQEFPVIPLAHGIQFTAYSKSLTGIRISPF 527
            +Y +A+  L ++ P++ LAH  +      ++  ++++PF
Sbjct: 486 EIYQEAEAFLAEQVPMLSLAHAKRVALSRSNIHDMQLTPF 525