Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., alginate biosynthesis transcriptional regulatory protein AlgB from Pseudomonas fluorescens FW300-N2E2

 Score =  207 bits (527), Expect = 4e-58
 Identities = 112/232 (48%), Positives = 146/232 (62%), Gaps = 1/232 (0%)

Query: 2   QQSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLN 61
           +  L   SPA   VL+   ++A  D  +L++GE GTGK  +AQ +H  SKR ++  V++N
Sbjct: 144 KDGLDSHSPAMKVVLETARQVASTDANILILGESGTGKGELAQAIHGWSKRAKKSCVTIN 203

Query: 62  CSTLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVI 121
           C +L+  L++SELFGH  G+FTGA     GR  +A+GGTLFLDE+   PL++Q KLLR I
Sbjct: 204 CPSLTAELMESELFGHSRGAFTGASESTLGRVNQADGGTLFLDEIGDFPLTLQPKLLRFI 263

Query: 122 EYGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPE 181
           +  +YERVG      A+VR++ ATN NL  M + G FR DLL RL    +HLP LR R E
Sbjct: 264 QDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRFREDLLYRLNVITLHLPPLRERAE 323

Query: 182 DIALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERA 233
           DI  LA+ F  R  +E   P   GFS  A   L  Y WPGN+REL+NVVERA
Sbjct: 324 DILTLADRFLARFVKEYARPA-RGFSDEAREALLGYRWPGNIRELRNVVERA 374