Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Flagellar regulatory protein FleQ from Pseudomonas fluorescens FW300-N2E2

 Score =  216 bits (549), Expect = 1e-60
 Identities = 119/234 (50%), Positives = 155/234 (66%), Gaps = 9/234 (3%)

Query: 3   QSLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNC 62
           + L+G SPAF   L ++ R+AP   PVL++GE GTGKEL A+ +H  S+R   P V ++C
Sbjct: 112 EGLVGSSPAFNQALLELQRVAPSMLPVLLLGESGTGKELFARAVHETSERAAGPFVVVDC 171

Query: 63  STLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIE 122
           S L+E L +SELFGHE G+FTGA  R  G  E A+GGTLFLDE+   PL++Q KLLR+IE
Sbjct: 172 SGLTETLFESELFGHEKGAFTGATTRKVGLVETAQGGTLFLDEIGDVPLAMQVKLLRLIE 231

Query: 123 YGQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPED 182
            G Y RVG  +  +A+ RLV AT+  L +M ++G FR DL  R++   IHLP LRHR ED
Sbjct: 232 SGTYRRVGSVETQHADFRLVAATHKPLEKMVEKGEFRQDLYYRISVFPIHLPPLRHRLED 291

Query: 183 IALLAEHFAIRM---CRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERA 233
           I LL + F  R     R L +       P AL QLQ ++WPGN+REL+NV+ERA
Sbjct: 292 IGLLVDSFLQRSGIGKRRLTI------DPEALMQLQRFAWPGNIRELRNVLERA 339