Pairwise Alignments

Query, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Pseudomonas stutzeri RCH2

 Score =  208 bits (530), Expect = 2e-58
 Identities = 110/230 (47%), Positives = 151/230 (65%), Gaps = 1/230 (0%)

Query: 4   SLLGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCS 63
           +L   SPA +AVL+   ++A  D  +L++GE GTGK  +A+ +H  S+R ++  V++NC 
Sbjct: 146 ALGSHSPAMMAVLETARQVADTDANILILGESGTGKGELARAIHTWSRRSKKAFVTINCP 205

Query: 64  TLSEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEY 123
           +LS  L++SELFGH  G+FTGA     GR  +A+GGTLFLDE+   PL++Q KLLR I+ 
Sbjct: 206 SLSADLMESELFGHNRGAFTGATESTLGRVNQADGGTLFLDEIGDFPLALQPKLLRFIQD 265

Query: 124 GQYERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDI 183
            +YERVG      A+VR++ ATN NL +M ++G FR DLL RL    ++LP +R RPED+
Sbjct: 266 KEYERVGDPVTRRADVRILAATNLNLEEMVREGKFREDLLYRLNVITLNLPPMRERPEDV 325

Query: 184 ALLAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERA 233
             LAE F     +    P   GFS  A+  L+ Y WPGNVREL+NVVERA
Sbjct: 326 LALAERFLASFVKNYGRPA-RGFSDAAIAALKTYRWPGNVRELRNVVERA 374